RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ABHD14AQ9BUJ0 271 aa4□□□□□ -1.77
HOXB3-213ENST00000552000 PARP12Q9H0J9 701 aaKnown RBP4□□□□□ -1.77
HOXB3-213ENST00000552000 MAGIXQ9H6Y5 334 aa4□□□□□ -1.77
HOXB3-213ENST00000552000 PEMTQ9UBM1 199 aa4□□□□□ -1.77
HOXB3-213ENST00000552000 PEF1Q9UBV8 284 aaKnown RBP4□□□□□ -1.77
HOXB3-213ENST00000552000 A0A087WWL8 130 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 A0A0B4J203 849 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 H3BUA1 57 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 GNGT2O14610 69 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 GEMIN2O14893 280 aaKnown RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 CDRT1O95170 752 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 CA2P00918 260 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 OR2T7P0C7T2 308 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ANXA8P13928 327 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 EDN2P20800 178 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 FASP25445 335 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 PPP1CCP36873 323 aaKnown RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 PPP5CP53041 499 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 CRISP1P54107 249 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 RBM11P57052 281 aaKnown RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 RPP30P78346 268 aaKnown RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ADARB1P78563 741 aaKnown RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ZNF45Q02386 682 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ALKBH1Q13686 389 aaKnown RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 FXYD3Q14802 87 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 SYT6Q5T7P8 510 aaPredicted RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 NXNL2Q5VZ03 156 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ZNF343Q6P1L6 599 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ZNF562Q6V9R5 426 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 GLDNQ6ZMI3 551 aaPredicted RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ZNF497Q6ZNH5 498 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 FAM220AQ7Z4H9 259 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 KCTD20Q7Z5Y7 419 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 C5orf24Q7Z6I8 188 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ODF3L1Q8IXM7 274 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 DEFB107AQ8IZN7 70 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 OR52L2PQ8NGH6 319 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 TMEM163Q8TC26 289 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 RNF183Q96D59 192 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 MRPS24Q96EL2 167 aaKnown RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 IL4I1Q96RQ9 567 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 GPER1Q99527 375 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 FAM192AQ9GZU8 254 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 RAB9BQ9NP90 201 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 OR2S2Q9NQN1 319 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 METTL1Q9UBP6 276 aaKnown RBP3.99□□□□□ -1.77
HOXB3-213ENST00000552000 TRAPPC2LQ9UL33 140 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ING4Q9UNL4 249 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 ST3GAL6Q9Y274 331 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 FAT1Q14517 4588 aa3.99□□□□□ -1.77
HOXB3-213ENST00000552000 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 SAA2-SAA4A0A096LPE2 208 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 C2orf70A6NJV1 201 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 H7C2Y5 167 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 BMPR1BO00238 502 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 GABRPO00591 440 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 SULT1B1O43704 296 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 AIREO43918 545 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 RBMXL2O75526 392 aaKnown RBP3.98□□□□□ -1.77
HOXB3-213ENST00000552000 B3GALNT1O75752 331 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 FADS2O95864 444 aaKnown RBP3.98□□□□□ -1.77
HOXB3-213ENST00000552000 IFNA4P05014 189 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 ISG15P05161 165 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 CD1AP06126 327 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 HTR1AP08908 422 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 SAA2P0DJI9 122 aaPredicted RBP3.98□□□□□ -1.77
HOXB3-213ENST00000552000 RAP2AP10114 183 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 RCC1P18754 421 aaPredicted RBP3.98□□□□□ -1.77
HOXB3-213ENST00000552000 AADACP22760 399 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 EPHA2P29317 976 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 KIR2DS2P43631 304 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 NANOS2P60321 138 aaKnown RBP3.98□□□□□ -1.77
HOXB3-213ENST00000552000 ZNF85Q03923 595 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 PTGES3Q15185 160 aaKnown RBP3.98□□□□□ -1.77
HOXB3-213ENST00000552000 PSG5Q15238 335 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 TMEM30BQ3MIR4 351 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 MORN2Q502X0 79 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 RPL39P5Q59GN2 51 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 C6orf183Q5T699 404 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 ZNF833PQ6ZTB9 187 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 Q6ZWC4 215 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 DHFR2Q86XF0 187 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 GID4Q8IVV7 300 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 STX19Q8N4C7 294 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 TMEM217Q8N7C4 229 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 OR51A2Q8NGJ7 313 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 OR52B4Q8NGK2 314 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 OR52N1Q8NH53 320 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 SNAPC3Q92966 411 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 PRRG3Q9BZD7 231 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 TINAGL1Q9GZM7 467 aaPredicted RBP3.98□□□□□ -1.77
HOXB3-213ENST00000552000 TAF9BQ9HBM6 251 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 ZC4H2Q9NQZ6 224 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 NDE1Q9NXR1 346 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 COA4Q9NYJ1 87 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 RCC2Q9P258 522 aaKnown RBP3.98□□□□□ -1.77
HOXB3-213ENST00000552000 FBXL17Q9UF56 701 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 WARS2Q9UGM6 360 aaKnown RBP3.98□□□□□ -1.77
HOXB3-213ENST00000552000 TP53TG1Q9Y2A0 90 aa3.98□□□□□ -1.77
HOXB3-213ENST00000552000 VPS13BQ7Z7G8 4022 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms