RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 AMY2AP04746 511 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 ELK1P19419 428 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 MC5RP33032 325 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 PRSS3P35030 304 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 VDAC2P45880 294 aaPredicted RBP13.79□□□□□ -0.2
CDK4-208ENST00000551706 ARPC4P59998 168 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 RPL39P5Q59GN2 51 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 C5orf56Q8N8D9 126 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 ISOC1Q96CN7 298 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 IFT46Q9NQC8 304 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 SERTAD4Q9NUC0 356 aa13.79□□□□□ -0.2
CDK4-208ENST00000551706 CCDC59Q9P031 241 aaKnown RBP13.79□□□□□ -0.2
CDK4-208ENST00000551706 NCBP2LA6PVI3 153 aaKnown RBP13.78□□□□□ -0.2
CDK4-208ENST00000551706 FAM25AB3EWG3 89 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 FAM25CB3EWG5 89 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 FAM25GB3EWG6 89 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 H3BMQ9 156 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 TPPPO94811 219 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 CT45A6P0DMU7 189 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 CT45A5P0DMU8 189 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 CT45A7P0DMV0 189 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 PTHLHP12272 177 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 GVQW1Q8N7I0 195 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 DYNC2LI1Q8TCX1 351 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 OR2D2Q9H210 308 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 SCPEP1Q9HB40 452 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 BATF3Q9NR55 127 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 ADAM30Q9UKF2 790 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 MRPS7Q9Y2R9 242 aaKnown RBP13.78□□□□□ -0.2
CDK4-208ENST00000551706 CEPT1Q9Y6K0 416 aa13.78□□□□□ -0.2
CDK4-208ENST00000551706 SLC22A5O76082 557 aa13.77□□□□□ -0.21
CDK4-208ENST00000551706 HLA-DQB1P01920 261 aa13.77□□□□□ -0.21
CDK4-208ENST00000551706 Q6ZS46 218 aa13.77□□□□□ -0.21
CDK4-208ENST00000551706 KLHDC1Q8N7A1 406 aa13.77□□□□□ -0.21
CDK4-208ENST00000551706 OR5AN1Q8NGI8 311 aa13.77□□□□□ -0.21
CDK4-208ENST00000551706 C15orf40Q8WUR7 153 aa13.77□□□□□ -0.21
CDK4-208ENST00000551706 CITED1Q99966 193 aa13.77□□□□□ -0.21
CDK4-208ENST00000551706 LIN7CQ9NUP9 197 aaKnown RBP13.77□□□□□ -0.21
CDK4-208ENST00000551706 NECAP2Q9NVZ3 263 aa13.77□□□□□ -0.21
CDK4-208ENST00000551706 OR2W1Q9Y3N9 320 aa13.77□□□□□ -0.21
CDK4-208ENST00000551706 CCDC160A6NGH7 325 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 H0YJW9 148 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 M0R1X1 148 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 SULT1C2O00338 296 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 RGS5O15539 181 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 VSIG10L2P0DP72 767 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 NFYAP23511 347 aaPredicted RBP13.76□□□□□ -0.21
CDK4-208ENST00000551706 LUMP51884 338 aaPredicted RBP13.76□□□□□ -0.21
CDK4-208ENST00000551706 C9orf152Q5JTZ5 239 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 FAM131AQ6UXB0 335 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 OR5AP2Q8NGF4 316 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 SNAPC3Q92966 411 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 PLSCR3Q9NRY6 295 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 SDHAF2Q9NX18 166 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 ANAPC10Q9UM13 185 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 WASHC3Q9Y3C0 194 aa13.76□□□□□ -0.21
CDK4-208ENST00000551706 WNK1Q9H4A3 2382 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 MEIS3P1A6NDR6 274 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 H7C2Y5 167 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 PROP1O75360 226 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 RBBP9O75884 186 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 APOA2P02652 100 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 ACTBP60709 375 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 TAGLNQ01995 201 aaKnown RBP13.75□□□□□ -0.21
CDK4-208ENST00000551706 MMDQ15546 238 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 Q8N9W7 124 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 GPX8Q8TED1 209 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 RNF5Q99942 180 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 RASL11BQ9BPW5 248 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 WNT10AQ9GZT5 417 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 EXTL2Q9UBQ6 330 aa13.75□□□□□ -0.21
CDK4-208ENST00000551706 ZNF701M0R085 212 aaPredicted RBP13.74□□□□□ -0.21
CDK4-208ENST00000551706 TUSC2O75896 110 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 OR5H8P0DN80 308 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 NAT1P18440 290 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 TAS2R46P59540 309 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 KRTAP10-3P60369 221 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 CDK10Q15131 360 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 GLDNQ6ZMI3 551 aaPredicted RBP13.74□□□□□ -0.21
CDK4-208ENST00000551706 PDPNQ86YL7 162 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 SNX29P2Q8IUI4 249 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 FAM71E2Q8N5Q1 922 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 ZNF645Q8N7E2 425 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 DRAXINQ8NBI3 349 aaPredicted RBP13.74□□□□□ -0.21
CDK4-208ENST00000551706 ADTRPQ96IZ2 230 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 KIAA1456Q9P272 454 aa13.74□□□□□ -0.21
CDK4-208ENST00000551706 SH2D7A6NKC9 451 aaPredicted RBP13.73□□□□□ -0.21
CDK4-208ENST00000551706 NBR2O15453 112 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 IGHG2P01859 326 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 FCER2P06734 321 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 FCGR2CP31995 323 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 THBS3P49746 956 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 F2RL1P55085 397 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 SRSF4Q08170 494 aaKnown RBP13.73□□□□□ -0.21
CDK4-208ENST00000551706 TMEM95Q3KNT9 176 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 SLC35E3Q7Z769 313 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 ZNF383Q8NA42 475 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 NPBQ8NG41 125 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 SLIRPQ9GZT3 109 aaKnown RBP13.73□□□□□ -0.21
CDK4-208ENST00000551706 RBM38Q9H0Z9 239 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms