RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 C2orf80Q0P641 193 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 TPBGQ13641 420 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 ORMDL2Q53FV1 153 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 ACSM3Q53FZ2 586 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 DUPD1Q68J44 220 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 DRAM2Q6UX65 266 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 LYPD2Q6UXB3 125 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 Q6ZS92 163 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 ARIH2OSQ8N7S6 290 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 COX18Q8N8Q8 333 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 MDS2Q8NDY4 140 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 PXT1Q8NFP0 134 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 OR51D1Q8NGF3 324 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 MUC7Q8TAX7 377 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 CASTOR1Q8WTX7 329 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 RNF138Q8WVD3 245 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 BAALCQ8WXS3 180 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 BORCS5Q969J3 196 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 ULBP3Q9BZM4 244 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 SPNS1Q9H2V7 528 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 ARMC1Q9NVT9 282 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 FBXL3Q9UKT7 428 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 RAB26Q9ULW5 256 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 NEU3Q9UQ49 428 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 PSG11Q9UQ72 335 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 SNX10Q9Y5X0 201 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 SPTBP11277 2137 aa3.59□□□□□ -1.84
CPSF6-206ENST00000550987 PRR14LQ5THK1 2151 aa3.59□□□□□ -1.84
CPSF6-206ENST00000550987 PVALEFA0A1B0GWK0 134 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 KLLNB2CW77 178 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 M0QYV0 167 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 M0QZK8 103 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 OR8U9P0C7N5 309 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 C8orf88P0DMB2 117 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 GNRHRP30968 328 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 CRISP3P54108 245 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 PSME3P61289 254 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 SLC35B1P78383 322 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 TNFRSF9Q07011 255 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 AESQ08117 197 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 KRR1Q13601 381 aaKnown RBP3.58□□□□□ -1.84
CPSF6-206ENST00000550987 SLC9A3R2Q15599 337 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 TMEM255AQ5JRV8 349 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 TRIQKQ629K1 86 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 CYB5R2Q6BCY4 276 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 FBXW12Q6X9E4 464 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 LINC00336Q6ZUF6 198 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 PCP2Q8IVA1 136 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 DEFB106AQ8N104 65 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 ARRDC1Q8N5I2 433 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 OR8U1Q8NH10 309 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 OR52N1Q8NH53 320 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 RNASE11Q8TAA1 199 aaKnown RBP3.58□□□□□ -1.84
CPSF6-206ENST00000550987 DHRS9Q9BPW9 319 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF2Q9BSG1 426 aaPredicted RBP3.58□□□□□ -1.84
CPSF6-206ENST00000550987 BCL2L14Q9BZR8 327 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 SLIRPQ9GZT3 109 aaKnown RBP3.58□□□□□ -1.84
CPSF6-206ENST00000550987 TMBIM4Q9HC24 238 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 DDIT4Q9NX09 232 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 OR12D3Q9UGF7 316 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
CPSF6-206ENST00000550987 DNAH11Q96DT5 4516 aa3.58□□□□□ -1.84
CPSF6-206ENST00000550987 A0A1W2PRG6 482 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 ANKRD20A5PA0PJZ0 165 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 SEC14L6B5MCN3 397 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 C21orf140B9A014 251 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 BET1O15155 118 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 ERI3O43414 337 aaKnown RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 TGOLN2O43493 480 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 KLRC4O43908 158 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF861PO60384 105 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 RAB36O95755 333 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 BCHEP06276 602 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 GUSBP08236 651 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 HOXC4P09017 264 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 PAEPP09466 180 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 PGA4P0DJD7 388 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 PGA3P0DJD8 388 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 PGA5P0DJD9 388 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 CD37P11049 281 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF35P13682 527 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 CRABP1P29762 137 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 PFN2P35080 140 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 SSTR5P35346 364 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 PPOXP50336 477 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 PAFAH1B2P68402 229 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 RPL19P84098 196 aaKnown RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 FLI1Q01543 452 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 MAD2L1BPQ15013 274 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 TOMM34Q15785 309 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF658BQ4V348 819 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 TIMM23BQ5SRD1 257 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 LYG2Q86SG7 212 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 PHF13Q86YI8 300 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 CLVS1Q8IUQ0 354 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 C2orf73Q8N5S3 287 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-206ENST00000550987 WDR31Q8NA23 367 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 UBAC2Q8NBM4 344 aa3.57□□□□□ -1.84
CPSF6-206ENST00000550987 OR10G6Q8NH81 332 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms