RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 OR2D2Q9H210 308 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 RAB18Q9NP72 206 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 TNFRSF19Q9NS68 423 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 VPREB3Q9UKI3 123 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 FBN3Q75N90 2809 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 TIMM23O14925 209 aa17.25■□□□□ 0.35
NEK3-202ENST00000550841 PPYP01298 95 aa17.25■□□□□ 0.35
NEK3-202ENST00000550841 AADACP22760 399 aa17.25■□□□□ 0.35
NEK3-202ENST00000550841 CD1BP29016 333 aa17.25■□□□□ 0.35
NEK3-202ENST00000550841 HERV-K104P61576 105 aa17.25■□□□□ 0.35
NEK3-202ENST00000550841 DRAM1Q8N682 238 aa17.25■□□□□ 0.35
NEK3-202ENST00000550841 GDPD1Q8N9F7 314 aa17.25■□□□□ 0.35
NEK3-202ENST00000550841 CAPSLQ8WWF8 208 aa17.25■□□□□ 0.35
NEK3-202ENST00000550841 DUX5Q96PT3 197 aa17.25■□□□□ 0.35
NEK3-202ENST00000550841 FAM90A9PA6NNJ1 464 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 J3QRK9 145 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 CD74P04233 296 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 CD3DP04234 171 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 RPL15P61313 204 aaKnown RBP17.24■□□□□ 0.35
NEK3-202ENST00000550841 HABP2Q14520 560 aaPredicted RBP17.24■□□□□ 0.35
NEK3-202ENST00000550841 MEF2DQ14814 521 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 RPL39P5Q59GN2 51 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 STEAP1BQ6NZ63 245 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 ZNF645Q8N7E2 425 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 BORCS5Q969J3 196 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 ZNF251Q9BRH9 671 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 ZNF2Q9BSG1 426 aaPredicted RBP17.24■□□□□ 0.35
NEK3-202ENST00000550841 CHIAQ9BZP6 476 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 TCF19Q9Y242 345 aa17.24■□□□□ 0.35
NEK3-202ENST00000550841 RAB3DO95716 219 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 CRYBA1P05813 215 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 MC5RP33032 325 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 AP3S2P59780 193 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 MSMO1Q15800 293 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 ZNF79Q15937 498 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 LY6EQ16553 131 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 ARRDC1Q8N5I2 433 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 ZBTB34Q8NCN2 500 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 OR56B4Q8NH76 319 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 S100ZQ8WXG8 99 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 CFHR4Q92496 578 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 NABP2Q9BQ15 211 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 SDHAF2Q9NX18 166 aa17.23■□□□□ 0.35
NEK3-202ENST00000550841 COL6A5A8TX70 2615 aa17.22■□□□□ 0.35
NEK3-202ENST00000550841 A6NDX4 124 aa17.22■□□□□ 0.35
NEK3-202ENST00000550841 M0R1X1 148 aa17.22■□□□□ 0.35
NEK3-202ENST00000550841 AKAIN1P0CW23 69 aa17.22■□□□□ 0.35
NEK3-202ENST00000550841 TAGLNQ01995 201 aaKnown RBP17.22■□□□□ 0.35
NEK3-202ENST00000550841 ZNF660Q6AZW8 331 aaPredicted RBP17.22■□□□□ 0.35
NEK3-202ENST00000550841 LPCAT3Q6P1A2 487 aa17.22■□□□□ 0.35
NEK3-202ENST00000550841 C16orf82Q7Z2V1 217 aa17.22■□□□□ 0.35
NEK3-202ENST00000550841 OR2T10Q8NGZ9 312 aa17.22■□□□□ 0.35
NEK3-202ENST00000550841 ADTRPQ96IZ2 230 aa17.22■□□□□ 0.35
NEK3-202ENST00000550841 MRPL20Q9BYC9 149 aaKnown RBP17.22■□□□□ 0.35
NEK3-202ENST00000550841 SRRQ9GZT4 340 aa17.22■□□□□ 0.35
NEK3-202ENST00000550841 IGKV1D-13A0A0B4J2D9 117 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 ANKRD20A5PA0PJZ0 165 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 M0QYG6 137 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 GPR137BO60478 399 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 SNRNP70P08621 437 aaKnown RBP17.21■□□□□ 0.35
NEK3-202ENST00000550841 CT45A6P0DMU7 189 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 CT45A5P0DMU8 189 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 CT45A7P0DMV0 189 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 IGKV1-13P0DP09 117 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 FXYD4P59646 89 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 LSAMPQ13449 338 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 EBI3Q14213 229 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 HES1Q14469 280 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 SECTM1Q8WVN6 248 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 DEDD2Q8WXF8 326 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 MOB3AQ96BX8 217 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 AKR1E2Q96JD6 320 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 SLC5A7Q9GZV3 580 aa17.21■□□□□ 0.35
NEK3-202ENST00000550841 OR5H14A6NHG9 310 aa17.2■□□□□ 0.34
NEK3-202ENST00000550841 DISC1C4P0D8 188 aa17.2■□□□□ 0.34
NEK3-202ENST00000550841 PROP1O75360 226 aa17.2■□□□□ 0.34
NEK3-202ENST00000550841 CD24P25063 80 aa17.2■□□□□ 0.34
NEK3-202ENST00000550841 FAUP35544 74 aaKnown RBP17.2■□□□□ 0.34
NEK3-202ENST00000550841 INPP1P49441 399 aa17.2■□□□□ 0.34
NEK3-202ENST00000550841 THBS3P49746 956 aa17.2■□□□□ 0.34
NEK3-202ENST00000550841 TOMM5Q8N4H5 51 aa17.2■□□□□ 0.34
NEK3-202ENST00000550841 TINAGL1Q9GZM7 467 aaPredicted RBP17.2■□□□□ 0.34
NEK3-202ENST00000550841 ATRQ13535 2644 aa17.19■□□□□ 0.34
NEK3-202ENST00000550841 IGHV3-72A0A0B4J1Y9 119 aa17.19■□□□□ 0.34
NEK3-202ENST00000550841 MOSP00540 346 aa17.19■□□□□ 0.34
NEK3-202ENST00000550841 IGKV1D-33P01593 117 aa17.19■□□□□ 0.34
NEK3-202ENST00000550841 IGKV1-33P01594 117 aa17.19■□□□□ 0.34
NEK3-202ENST00000550841 TMEM11P17152 192 aa17.19■□□□□ 0.34
NEK3-202ENST00000550841 OR5AN1Q8NGI8 311 aa17.19■□□□□ 0.34
NEK3-202ENST00000550841 RBM14Q96PK6 669 aaKnown RBP17.19■□□□□ 0.34
NEK3-202ENST00000550841 FAM181BA6NEQ2 426 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 OR2F2O95006 317 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 APOA2P02652 100 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 AMY2AP04746 511 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 UCP3P55916 312 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 TRIQKQ629K1 86 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 DHRS7BQ6IAN0 325 aaPredicted RBP17.18■□□□□ 0.34
NEK3-202ENST00000550841 CCBE1Q6UXH8 406 aaPredicted RBP17.18■□□□□ 0.34
NEK3-202ENST00000550841 OR8H1Q8NGG4 311 aa17.18■□□□□ 0.34
NEK3-202ENST00000550841 TERB2Q8NHR7 220 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms