RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 VAX2Q9UIW0 290 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 CFL2Q9Y281 166 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 LRRC42Q9Y546 428 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 TRGV5A0A0B4J1U4 118 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 IGHV1-3A0A0C4DH29 117 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 H3BQV1 296 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 GOLGA8RI6L899 631 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 DFFAO00273 331 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 MYL12BO14950 172 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 TRAPPC6AO75865 159 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 ATP5HO75947 161 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 CDK14O94921 469 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 PTTG1O95997 202 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 GCGP01275 180 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 PAEPP09466 180 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 SLC35G6P0C7Q6 338 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 M6PRP20645 277 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 PSMB5P28074 263 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 HSPA13P48723 471 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 ERFP50548 548 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 AP1S1P61966 158 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 UBA52P62987 128 aaKnown RBP2.69□□□□□ -1.98
LIMA1-205ENST00000550592 SLC35A1P78382 337 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 SLC35B1P78383 322 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 C2orf54Q08AI8 447 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 ST3GAL4Q11206 333 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 CASP8Q14790 479 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 UGT2A3Q6UWM9 527 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 TEX29Q8N6K0 151 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 C10orf105Q8TEF2 133 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 MITD1Q8WV92 249 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 CPNE4Q96A23 557 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-205ENST00000550592 CCDC42Q96M95 316 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 LZTFL1Q9NQ48 299 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 SDHAF3Q9NRP4 125 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 PSMD13Q9UNM6 376 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 C15orf41Q9Y2V0 281 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 KLF12Q9Y4X4 402 aa2.69□□□□□ -1.98
LIMA1-205ENST00000550592 IGHV2OR16-5A0A0B4J2B6 119 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 SPOPO43791 374 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 GMDSO60547 372 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 CCDC22O60826 627 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 NIPSNAP2O75323 286 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 KLHL2O95198 593 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 IFNA14P01570 189 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 CELP19835 753 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 CFL1P23528 166 aaKnown RBP2.68□□□□□ -1.98
LIMA1-205ENST00000550592 CD79BP40259 229 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 GCLMP48507 274 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 HCCSP53701 268 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 MTPNP58546 118 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 S100A12P80511 92 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 COTL1Q14019 142 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 ATP6V1FQ16864 119 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 FBXO48Q5FWF7 155 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 DEFB121Q5J5C9 76 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 CPTPQ5TA50 214 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 PDPK2PQ6A1A2 396 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 FAM173BQ6P4H8 233 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 ERICH5Q6P6B1 374 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 SLC25A34Q6PIV7 304 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 AKAP14Q86UN6 197 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 SLC51BQ86UW2 128 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 TRAPPC5Q8IUR0 188 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 NELFCDQ8IXH7 590 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 TMEM156Q8N614 296 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 ZDHHC22Q8N966 263 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 MUC7Q8TAX7 377 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 SFXN5Q8TD22 340 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 RMI2Q96E14 147 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 ZFP3Q96NJ6 502 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 SIKE1Q9BRV8 207 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 CHID1Q9BWS9 393 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 TTTY12Q9BZ98 90 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 ULBP2Q9BZM5 246 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 XKR8Q9H6D3 395 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 FAIMQ9NVQ4 179 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 FLVCR2Q9UPI3 526 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 PPIL1Q9Y3C6 166 aa2.68□□□□□ -1.98
LIMA1-205ENST00000550592 GOLGA8QA0A0J9YX86 632 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 A0A0J9YY10 115 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 BTNL10A8MVZ5 291 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 CENPBD1B2RD01 187 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 GOLGA8KD6RF30 607 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 NDUFS8O00217 210 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 POP7O75817 140 aaKnown RBP2.67□□□□□ -1.98
LIMA1-205ENST00000550592 SCO1O75880 301 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 KRT75O95678 551 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 RPN2P04844 631 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 HMGN1P05114 100 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 CRABP2P29373 138 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 GNRHRP30968 328 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 GTF2H1P32780 548 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 UGT2B10P36537 528 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 GDI2P50395 445 aaKnown RBP2.67□□□□□ -1.98
LIMA1-205ENST00000550592 STC1P52823 247 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 CMC4P56277 68 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-205ENST00000550592 TAS2R60P59551 318 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms