RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 OR8U9P0C7N5 309 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 GP9P14770 177 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 MC5RP33032 325 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 CHRNA7P36544 502 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 RPS27AP62979 156 aaKnown RBP5.88□□□□□ -1.47
NEK3-201ENST00000550331 NDPQ00604 133 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 GABPB1Q06547 395 aaPredicted RBP5.88□□□□□ -1.47
NEK3-201ENST00000550331 TMEM267Q0VDI3 215 aaPredicted RBP5.88□□□□□ -1.47
NEK3-201ENST00000550331 ECSCRQ19T08 205 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 ACSM6Q6P461 480 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 CD200R1LQ6Q8B3 271 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 FAM131AQ6UXB0 335 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 MOB1BQ7L9L4 216 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 SBSPONQ8IVN8 264 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 MS4A15Q8N5U1 240 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 PACRGLQ8N7B6 248 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 OR5AN1Q8NGI8 311 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 CYGBQ8WWM9 190 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 IL1F10Q8WWZ1 152 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 PHYHIPQ92561 330 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 DLX4Q92988 240 aaPredicted RBP5.88□□□□□ -1.47
NEK3-201ENST00000550331 FLYWCH2Q96CP2 140 aaKnown RBP5.88□□□□□ -1.47
NEK3-201ENST00000550331 CYYR1Q96J86 154 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 RNF5Q99942 180 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 SULT4A1Q9BR01 284 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 TM2D1Q9BX74 207 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 RNF150Q9ULK6 438 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 WASHC3Q9Y3C0 194 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 FBXO7Q9Y3I1 522 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 IGHV4OR15-8A0A075B7B6 117 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 A0A087WW49 117 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 H0YJW9 148 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 SPDEFO95238 335 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 TFAP2AP05549 437 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 FRMD6-AS1P0C7T7 363 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 CT45A6P0DMU7 189 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 CT45A5P0DMU8 189 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 CT45A7P0DMV0 189 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 SPNP16150 400 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 CD40LGP29965 261 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 SLURP1P55000 103 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 PITPNAQ00169 270 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 PLGLAQ15195 96 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 AKIRIN2Q53H80 203 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 ACTBL2Q562R1 376 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 C1orf100Q5SVJ3 147 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 GLT8D1Q68CQ7 371 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 ZFAND6Q6FIF0 208 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 OR10K2Q6IF99 312 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 ZNF880Q6PDB4 577 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 ZNF562Q6V9R5 426 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 AHSA2Q719I0 299 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 C6orf201Q7Z4U5 140 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 C5orf24Q7Z6I8 188 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 C8orf59Q8N0T1 100 aaPredicted RBP5.87□□□□□ -1.47
NEK3-201ENST00000550331 DHRSXQ8N5I4 330 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 NANOGP1Q8N7R0 232 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 KCNG3Q8TAE7 436 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 ARPC1AQ92747 370 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 OR4C12Q96R67 309 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 FAAP24Q9BTP7 215 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 TMEM59Q9BXS4 323 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 ALX4Q9H161 411 aaPredicted RBP5.87□□□□□ -1.47
NEK3-201ENST00000550331 RIMS4Q9H426 269 aaPredicted RBP5.87□□□□□ -1.47
NEK3-201ENST00000550331 FBXL15Q9H469 300 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 SLA2Q9H6Q3 261 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 ZMAT4Q9H898 229 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 PSORS1C1Q9UIG5 152 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 MGAT4AQ9UM21 535 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 NUBP2Q9Y5Y2 271 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 SORL1Q92673 2214 aa5.87□□□□□ -1.47
NEK3-201ENST00000550331 ALMS1Q8TCU4 4167 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 TRBV6-6A0A0A6YYG2 114 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 TMEM14DPA8MWL7 114 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 H7C2Y5 167 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 FCN1O00602 326 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 SLC22A1O15245 554 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 BPNT1O95861 308 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 GSTP1P09211 210 aaKnown RBP5.86□□□□□ -1.47
NEK3-201ENST00000550331 MED14OSP0DP75 135 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 CD37P11049 281 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 EGR2P11161 476 aaPredicted RBP5.86□□□□□ -1.47
NEK3-201ENST00000550331 ZBTB25P24278 435 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 HTR2CP28335 458 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 UNC119Q13432 240 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 ACSM3Q53FZ2 586 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 RPL39P5Q59GN2 51 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 RBM48Q5RL73 367 aaKnown RBP5.86□□□□□ -1.47
NEK3-201ENST00000550331 RNLSQ5VYX0 342 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 LAIR2Q6ISS4 152 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 UNQ5815/PRO19632Q6UWF5 114 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 GLDNQ6ZMI3 551 aaPredicted RBP5.86□□□□□ -1.47
NEK3-201ENST00000550331 OVCH2Q7RTZ1 564 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 LRRTM1Q86UE6 522 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 PPP1R27Q86WC6 154 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 OR6M1Q8NGM8 313 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 ABHD5Q8WTS1 349 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 CASTOR1Q8WTX7 329 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 PTX4Q96A99 478 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 RHOVQ96L33 236 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms