RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 MSI2Q96DH6 328 aaKnown RBP14.17□□□□□ -0.14
LETMD1-220ENST00000549686 FAM212BQ9NTI7 297 aaPredicted RBP14.17□□□□□ -0.14
LETMD1-220ENST00000549686 PRRC2AP48634 2157 aaKnown RBP14.16□□□□□ -0.14
LETMD1-220ENST00000549686 A0A0A6YYJ9 748 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 A0A0B4J293 547 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 A0A0B4J2A0 478 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 C3orf85A0A1B0GTC6 90 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 H0Y980 276 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 TXNL1O43396 289 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 TGFAP01135 160 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 HOXB4P17483 251 aaPredicted RBP14.16□□□□□ -0.14
LETMD1-220ENST00000549686 F2RP25116 425 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 HTR1DP28221 377 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 KIR2DS2P43631 304 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 THBS3P49746 956 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 TAGLNQ01995 201 aaKnown RBP14.16□□□□□ -0.14
LETMD1-220ENST00000549686 EIF4EBP1Q13541 118 aaPredicted RBP14.16□□□□□ -0.14
LETMD1-220ENST00000549686 MINOS1Q5TGZ0 78 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 HCP5Q6MZN7 132 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 OR4P4Q8NGL7 312 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 COQ8AQ8NI60 647 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 CD300LFQ8TDQ1 290 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 ZNF251Q9BRH9 671 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 OR51J1Q9H342 316 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 C7orf69Q9H7B7 122 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 SHPKQ9UHJ6 478 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 MINOS1-NBL1R4GNA1 71 aa14.16□□□□□ -0.14
LETMD1-220ENST00000549686 CSMD2Q7Z408 3487 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 LEUTXA8MZ59 168 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 RNASEK-C17orf49H0YIS7 233 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 BUB1B-PAK6H3BSN5 160 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 M0R1X1 148 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 TNFSF12O43508 249 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 ARG1P05089 322 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 DUTP33316 252 aaKnown RBP14.15□□□□□ -0.14
LETMD1-220ENST00000549686 SUPT4H1P63272 117 aaKnown RBP14.15□□□□□ -0.14
LETMD1-220ENST00000549686 MITD1Q8WV92 249 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 ST6GALNAC6Q969X2 333 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 C5orf30Q96GV9 206 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 PHB2Q99623 299 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 SEC22CQ9BRL7 303 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 DPM3Q9P2X0 92 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 PRELID3BQ9Y3B1 194 aa14.15□□□□□ -0.14
LETMD1-220ENST00000549686 TBL2Q9Y4P3 447 aaKnown RBP14.15□□□□□ -0.14
LETMD1-220ENST00000549686 OOSP1A8MZH6 123 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 EPHA1P21709 976 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 LGALS4P56470 323 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 CBX3Q13185 183 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 MIDNQ504T8 468 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 RPL39P5Q59GN2 51 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 TEX29Q8N6K0 151 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 MAPK1IP1LQ8NDC0 245 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 TCTEX1D2Q8WW35 142 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 LHX4Q969G2 390 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 CREBBPQ92793 2442 aa14.14□□□□□ -0.15
LETMD1-220ENST00000549686 YLPM1P49750 1951 aaKnown RBP14.13□□□□□ -0.15
LETMD1-220ENST00000549686 MED13LQ71F56 2210 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 SSNA1O43805 119 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 PROP1O75360 226 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 GAPDHP04406 335 aaKnown RBP14.13□□□□□ -0.15
LETMD1-220ENST00000549686 OR5AC1P0C628 307 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 RPA2P15927 270 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 UCP1P25874 307 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 ZNF816Q0VGE8 651 aaPredicted RBP14.13□□□□□ -0.15
LETMD1-220ENST00000549686 KLRD1Q13241 179 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 CCDC144NLQ6NUI1 221 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 TGIF2LXQ8IUE1 241 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 C12orf45Q8N5I9 185 aaPredicted RBP14.13□□□□□ -0.15
LETMD1-220ENST00000549686 OR51H1Q8NH63 302 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 CASTOR1Q8WTX7 329 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 IL22RA2Q969J5 263 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 RPEQ96AT9 228 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 TMEM222Q9H0R3 208 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 ITGB1BP2Q9UKP3 347 aa14.13□□□□□ -0.15
LETMD1-220ENST00000549686 PDZD2O15018 2839 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 LY6LH3BQJ8 138 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 RBFOX2O43251 390 aaKnown RBP eCLIP14.12□□□□□ -0.152e-6■□□□□ 9.5
LETMD1-220ENST00000549686 SERPINE2P07093 398 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 TRAPPC2P0DI81 140 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 TRAPPC2BP0DI82 140 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 RRASP10301 218 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 DLX1P56177 255 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 BPIFB3P59826 476 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 TMEM187Q14656 261 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 SLC9A3R2Q15599 337 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 GPR157Q5UAW9 335 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 LIAT1Q6ZQX7 453 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 LGI3Q8N145 548 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 LRTM2Q8N967 370 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 OR52B4Q8NGK2 314 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 TP53RKQ96S44 253 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 MED28Q9H204 178 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 ZNRD1Q9P1U0 126 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 ITPR2Q14571 2701 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 CCDC168Q8NDH2 2452 aa14.12□□□□□ -0.15
LETMD1-220ENST00000549686 IGHV1-69DA0A0B4J2H0 117 aa14.11□□□□□ -0.15
LETMD1-220ENST00000549686 CENPVL3A0A0U1RRI6 287 aa14.11□□□□□ -0.15
LETMD1-220ENST00000549686 A0A1B0GVG6 124 aa14.11□□□□□ -0.15
LETMD1-220ENST00000549686 DUXBA0A1W2PPF3 345 aa14.11□□□□□ -0.15
LETMD1-220ENST00000549686 ATG12O94817 140 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms