RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 LY6G6CO95867 125 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 LPLP06858 475 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 SCTP09683 121 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 GNB3P16520 340 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 TMEM11P17152 192 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 SCAND1P57086 179 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 SRSF7Q16629 238 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTCH1-217ENST00000548420 ZNF833PQ6ZTB9 187 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 C8orf86Q6ZUL3 223 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 OR2T10Q8NGZ9 312 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 IL1F10Q8WWZ1 152 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 DUX3Q96PT4 197 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 ZNF251Q9BRH9 671 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 IFI27L2Q9H2X8 130 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 GHITMQ9H3K2 345 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 DAPK2Q9UIK4 370 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 ZNF256Q9Y2P7 627 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-217ENST00000548420 LOC100506127A0A0U1RQW1 187 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 TRDCB7Z8K6 153 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 RRP9O43818 475 aaKnown RBP10.91□□□□□ -0.66
PTCH1-217ENST00000548420 TMEM127O75204 238 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 DIRAS3O95661 229 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 MOSP00540 346 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 ZBTB25P24278 435 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 LSAMPQ13449 338 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 HES1Q14469 280 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 HNF4GQ14541 408 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 TIMM50Q3ZCQ8 353 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 FAM71F2Q6NXP2 309 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 Q6ZS49 121 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 OR2AK2Q8NG84 335 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 SETD6Q8TBK2 473 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 NABP2Q9BQ15 211 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 PARP12Q9H0J9 701 aaKnown RBP10.91□□□□□ -0.66
PTCH1-217ENST00000548420 SLC23A1Q9UHI7 598 aa10.91□□□□□ -0.66
PTCH1-217ENST00000548420 VPS13DQ5THJ4 4388 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 SH2D7A6NKC9 451 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-217ENST00000548420 PROP1O75360 226 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 IGHG2P01859 326 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 FCGR3AP08637 254 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 CD3GP09693 182 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 CEACAM6P40199 344 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 MYCNOSP40205 109 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 OR3A3P47888 321 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 ARL6IP1Q15041 203 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 CDNFQ49AH0 187 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 Q8N9W7 124 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 OR8H1Q8NGG4 311 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 OR4A4PQ8NGN8 299 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 CABLES2Q9BTV7 478 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 C11orf54Q9H0W9 315 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-217ENST00000548420 ATG5Q9H1Y0 275 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 VCX3AQ9NNX9 186 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 PIPOXQ9P0Z9 390 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 OR1A1Q9P1Q5 309 aa10.9□□□□□ -0.66
PTCH1-217ENST00000548420 SAA2-SAA4A0A096LPE2 208 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 RAB29O14966 203 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 ST8SIA5O15466 376 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 SCGNO76038 276 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 SAA2P0DJI9 122 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-217ENST00000548420 MXD1Q05195 221 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 ZNF260Q3ZCT1 412 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 FAM71E2Q8N5Q1 922 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 OR4X2Q8NGF9 303 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 OR5H6Q8NGV6 325 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 LGALS14Q8TCE9 139 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 EDARADDQ8WWZ3 215 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 MRPL20Q9BYC9 149 aaKnown RBP10.89□□□□□ -0.67
PTCH1-217ENST00000548420 ABCG5Q9H222 651 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 ELF5Q9UKW6 265 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-217ENST00000548420 ETV7Q9Y603 341 aa10.89□□□□□ -0.67
PTCH1-217ENST00000548420 TRBV6-7A0A0A0MS04 114 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 FABP7O15540 132 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 SLC25A17O43808 307 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 AIREO43918 545 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 GSTP1P09211 210 aaKnown RBP10.88□□□□□ -0.67
PTCH1-217ENST00000548420 GSTT2P0CG29 244 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 GSTT2BP0CG30 244 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 CT45A6P0DMU7 189 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 CT45A5P0DMU8 189 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 CT45A7P0DMV0 189 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 DTYMKP23919 212 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 TGFBR1P36897 503 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 SERPINB10P48595 397 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 F2RL1P55085 397 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 MRPS15P82914 257 aaKnown RBP10.88□□□□□ -0.67
PTCH1-217ENST00000548420 KIR2DS1Q14954 304 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 HACD4Q5VWC8 232 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 SLC25A38Q96DW6 304 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 S1PR3Q99500 378 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 LIN7CQ9NUP9 197 aaKnown RBP10.88□□□□□ -0.67
PTCH1-217ENST00000548420 RHBDL2Q9NX52 303 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 ZNF230Q9UIE0 474 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-217ENST00000548420 SPATA2Q9UM82 520 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 GAB2Q9UQC2 676 aa10.88□□□□□ -0.67
PTCH1-217ENST00000548420 A0A075B6Q4 140 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 IGKV1D-8A0A087WSZ0 117 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 LINC01548A6NM66 108 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 HSPA12AO43301 675 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 SMIM18P0DKX4 95 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms