RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ID3Q02535 119 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 EIF4EBP1Q13541 118 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-215ENST00000547672 LTC4SQ16873 150 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 TMEM200BQ69YZ2 307 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 FOXRED2Q8IWF2 684 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 FGFRL1Q8N441 504 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 SCARB1Q8WTV0 552 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 NEIL1Q96FI4 390 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-215ENST00000547672 SPOCK3Q9BQ16 436 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 GSX2Q9BZM3 304 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 COL6A6A6NMZ7 2263 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 ANKHD1Q8IWZ3 2542 aaKnown RBP11.1□□□□□ -0.63
PTCH1-215ENST00000547672 LAMA5O15230 3695 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 PKD1L2Q7Z442 2459 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 DSCAMO60469 2012 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 BORCS7-ASMTA0A0B4J1R7 106 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 RNF222A6NCQ9 220 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 H0YIZ8 118 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 ST8SIA5O15466 376 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 JTBO76095 146 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 F12P00748 615 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-215ENST00000547672 S100A1P23297 94 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 IL3RAP26951 378 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 ERVK-16P61578 105 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 RPL23AP62750 156 aaKnown RBP11.1□□□□□ -0.63
PTCH1-215ENST00000547672 ZNF585BQ52M93 769 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 FAM71F2Q6NXP2 309 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 TGIF2LYQ8IUE0 185 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 OR8H3Q8N146 312 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 TNFRSF14Q92956 283 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 ZNF471Q9BX82 626 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-215ENST00000547672 PARP12Q9H0J9 701 aaKnown RBP11.1□□□□□ -0.63
PTCH1-215ENST00000547672 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-215ENST00000547672 DCAF16Q9NXF7 216 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 OR5AC2Q9NZP5 309 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 ATRXP46100 2492 aa11.1□□□□□ -0.63
PTCH1-215ENST00000547672 ARFGEF3Q5TH69 2177 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 M0R1X1 148 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 TOR1AO14656 332 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 PPIHO43447 177 aaKnown RBP11.09□□□□□ -0.63
PTCH1-215ENST00000547672 SELLP14151 372 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 DUTP33316 252 aaKnown RBP11.09□□□□□ -0.63
PTCH1-215ENST00000547672 EFNA4P52798 201 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 PRRX1P54821 245 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 TAS2R30P59541 319 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 EXOSC2Q13868 293 aaKnown RBP11.09□□□□□ -0.63
PTCH1-215ENST00000547672 CLLU1Q5K131 121 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 DHRS7BQ6IAN0 325 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-215ENST00000547672 SLC25A48Q6ZT89 311 aaKnown RBP11.09□□□□□ -0.63
PTCH1-215ENST00000547672 H2BFWTQ7Z2G1 175 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 LINC00311Q8N616 119 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 OR4S2Q8NH73 311 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 STOML3Q8TAV4 291 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 GPR146Q96CH1 333 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
PTCH1-215ENST00000547672 PITX3O75364 302 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 HRASP01112 189 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 GAPDHP04406 335 aaKnown RBP11.08□□□□□ -0.64
PTCH1-215ENST00000547672 HKR1P10072 659 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 HTR2BP41595 481 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 TLE4Q04727 773 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 BAXQ07812 192 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 RTL8BQ17RB0 113 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 CT45A1Q5HYN5 189 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 LYPD2Q6UXB3 125 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 CT45A3Q8NHU0 189 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 ST8SIA2Q92186 375 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 TMEM186Q96B77 213 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 CIB3Q96Q77 187 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-215ENST00000547672 SLC25A32Q9H2D1 315 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 IFI27L2Q9H2X8 130 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 C19orf12Q9NSK7 152 aa11.08□□□□□ -0.64
PTCH1-215ENST00000547672 ZZEF1O43149 2961 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 ITPR1Q14643 2758 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 A0A087X0M5 115 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 A0A1B0GX30 115 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 SOD3P08294 240 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 NQO2P16083 231 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 OMGP23515 440 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 BAP18Q8IXM2 172 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 LYG1Q8N1E2 194 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 OR2C3Q8N628 320 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 ZNF439Q8NDP4 499 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 OR9G1Q8NH87 305 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 C8orf46Q8TAG6 207 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 CLCC1Q96S66 551 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 GPHA2Q96T91 129 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 CACNG5Q9UF02 275 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 RCL1Q9Y2P8 373 aaKnown RBP11.07□□□□□ -0.64
PTCH1-215ENST00000547672 WSB1Q9Y6I7 421 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 SESN1Q9Y6P5 492 aa11.07□□□□□ -0.64
PTCH1-215ENST00000547672 RAI1Q7Z5J4 1906 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-215ENST00000547672 C17orf98A8MV24 154 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 SYNGR2O43760 224 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 FCGR3BO75015 233 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 ATP6V1G1O75348 118 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 KRASP01116 189 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 LIPFP07098 398 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 EPHA1P21709 976 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 GPR6P46095 362 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms