RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 OR5H14A6NHG9 310 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 LDLRAD4O15165 306 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 ZBTB25P24278 435 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 CALRP27797 417 aaKnown RBP10.34□□□□□ -0.75
CPSF6-204ENST00000547486 MC5RP33032 325 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 CRIP2P52943 208 aaPredicted RBP10.34□□□□□ -0.75
CPSF6-204ENST00000547486 HLA-DRB3P79483 266 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 ZNF616Q08AN1 781 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 MLLT11Q13015 90 aaPredicted RBP10.34□□□□□ -0.75
CPSF6-204ENST00000547486 ECSCRQ19T08 205 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 ZNF383Q8NA42 475 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 DCUN1D4Q92564 292 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 PTX4Q96A99 478 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 FAM3DQ96BQ1 224 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 CLCC1Q96S66 551 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 MGLLQ99685 303 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 CCDC90BQ9GZT6 254 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 TPSG1Q9NRR2 321 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 KCNK7Q9Y2U2 307 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 A3GALT2U3KPV4 340 aa10.34□□□□□ -0.75
CPSF6-204ENST00000547486 A0A1W2PN81 502 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 H7C2Y5 167 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 HSPA12AO43301 675 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 ARL6IP5O75915 188 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 IGKV1-16P04430 117 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 GSTP1P09211 210 aaKnown RBP10.33□□□□□ -0.76
CPSF6-204ENST00000547486 OR8U8P0C7N1 319 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 CHRNA7P36544 502 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 PSG5Q15238 335 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 TRAM1Q15629 374 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 PRSS48Q7RTY5 328 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 DLX4Q92988 240 aaPredicted RBP10.33□□□□□ -0.76
CPSF6-204ENST00000547486 FAM103A1Q9BTL3 118 aaKnown RBP10.33□□□□□ -0.76
CPSF6-204ENST00000547486 GHITMQ9H3K2 345 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 C12orf4Q9NQ89 552 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 WASHC3Q9Y3C0 194 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 V9GY05 133 aa10.33□□□□□ -0.76
CPSF6-204ENST00000547486 RYR3Q15413 4870 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 TMEM272A0A1B0GTI8 110 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 SHISA3A0PJX4 238 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 TRDCB7Z8K6 153 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 CD3GP09693 182 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 PSMA1P25786 263 aaKnown RBP10.32□□□□□ -0.76
CPSF6-204ENST00000547486 SLURP1P55000 103 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 DCTN2Q13561 401 aaKnown RBP10.32□□□□□ -0.76
CPSF6-204ENST00000547486 PLGLAQ15195 96 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 MOGAT2Q3SYC2 334 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 HES5Q5TA89 166 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 PPP1R27Q86WC6 154 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 WWC2-AS2Q96NR7 200 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 RNF5Q99942 180 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 CMSS1Q9BQ75 279 aaKnown RBP10.32□□□□□ -0.76
CPSF6-204ENST00000547486 TOLLIPQ9H0E2 274 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 ACOT13Q9NPJ3 140 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 RDH8Q9NYR8 311 aa10.32□□□□□ -0.76
CPSF6-204ENST00000547486 FOXA2Q9Y261 457 aaPredicted RBP10.32□□□□□ -0.76
CPSF6-204ENST00000547486 NBEAL2Q6ZNJ1 2754 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 DENRO43583 198 aaKnown RBP10.31□□□□□ -0.76
CPSF6-204ENST00000547486 RBBP9O75884 186 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 NHLRC4P0CG21 123 aaPredicted RBP10.31□□□□□ -0.76
CPSF6-204ENST00000547486 OR10A3P58181 314 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 SSX1Q16384 188 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 CD200R1LQ6Q8B3 271 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 ZNF562Q6V9R5 426 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 LFNGQ8NES3 379 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 OR56B1Q8NGI3 324 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 EDARADDQ8WWZ3 215 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 MS4A10Q96PG2 267 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 ASCL2Q99929 193 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 METTL1Q9UBP6 276 aaKnown RBP10.31□□□□□ -0.76
CPSF6-204ENST00000547486 RAB22AQ9UL26 194 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 MGAT4AQ9UM21 535 aa10.31□□□□□ -0.76
CPSF6-204ENST00000547486 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
CPSF6-204ENST00000547486 IGHV4OR15-8A0A075B7B6 117 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 A0A087WW49 117 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 OVOL1O14753 267 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 ARPC1BO15143 372 aaKnown RBP10.3□□□□□ -0.76
CPSF6-204ENST00000547486 CA2P00918 260 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 IGHV3-11P01762 117 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 LGALS1P09382 135 aaKnown RBP10.3□□□□□ -0.76
CPSF6-204ENST00000547486 GSTT2P0CG29 244 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 GSTT2BP0CG30 244 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 INSL3P51460 131 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 RPS16P62249 146 aaKnown RBP10.3□□□□□ -0.76
CPSF6-204ENST00000547486 SSBP2P81877 361 aaPredicted RBP10.3□□□□□ -0.76
CPSF6-204ENST00000547486 AKIRIN2Q53H80 203 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 ACTBL2Q562R1 376 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 IGSF11Q5DX21 431 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 UNQ5815/PRO19632Q6UWF5 114 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 ABHD5Q8WTS1 349 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 MAFIPQ8WZ33 124 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 ZNF221Q9UK13 617 aa10.3□□□□□ -0.76
CPSF6-204ENST00000547486 A0A0B4J203 849 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 LINC01619G3V211 115 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 M0R1X1 148 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 TFAP2AP05549 437 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 OR8U9P0C7N5 309 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 GNB3P16520 340 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 PSMD7P51665 324 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 TMEM267Q0VDI3 215 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms