RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CLDN14O95500 239 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 NMUP48645 174 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 IL11RAQ14626 422 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 OR2H1Q9GZK4 316 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 A0A1B0GW15 77 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 NTN1O95631 604 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 CRYBA2P53672 197 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 RELBQ01201 579 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 SLC23A3Q6PIS1 610 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 ANKRD37Q7Z713 158 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 GPR146Q96CH1 333 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 C5orf30Q96GV9 206 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 SH3BGRL3Q9H299 93 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 NDUFB3O43676 98 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 PGLYRP1O75594 196 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-212ENST00000546744 UCP1P25874 307 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 DMRTC1Q5HYR2 192 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 RHBDD2Q6NTF9 364 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 CRIPAKQ8N1N5 446 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 SNRNP40Q96DI7 357 aaKnown RBP11.07□□□□□ -0.64
PTCH1-212ENST00000546744 TRAV1-1A0A0B4J248 108 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 GPX4P36969 197 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-212ENST00000546744 GNB1P62873 340 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 LRRC75BQ2VPJ9 315 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 PIGYQ3MUY2 71 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 GRAMD2BQ96HH9 432 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 FBLN7Q53RD9 439 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 PKIBQ9C010 78 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 TCFL5Q9UL49 500 aa11.07□□□□□ -0.64
PTCH1-212ENST00000546744 C8orf88P0DMB2 117 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 TMEM11P17152 192 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 ID4P47928 161 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 SEC11AP67812 179 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 MRGPRDQ8TDS7 321 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 GATAD1Q8WUU5 269 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 KCNS1Q96KK3 526 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 RNF126Q9BV68 326 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 G6PC2Q9NQR9 355 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 TBL2Q9Y4P3 447 aaKnown RBP11.06□□□□□ -0.64
PTCH1-212ENST00000546744 PDCD11Q14690 1871 aaKnown RBP11.06□□□□□ -0.64
PTCH1-212ENST00000546744 DUSP2Q05923 314 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 TCF24Q7RTU0 167 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 OR52M1Q8NGK5 317 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 LRRC61Q9BV99 259 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 MRPL37Q9BZE1 423 aaKnown RBP11.06□□□□□ -0.64
PTCH1-212ENST00000546744 FBLL1A6NHQ2 334 aaKnown RBP11.06□□□□□ -0.64
PTCH1-212ENST00000546744 K7N7A8 449 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 RBP4P02753 201 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 DRD3P35462 400 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 CEACAM21Q3KPI0 293 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 LINC00696Q6ZRV3 163 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 FAM117AQ9C073 453 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 AP5S1Q9NUS5 200 aa11.06□□□□□ -0.64
PTCH1-212ENST00000546744 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 B4E171 279 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 PRKNO60260 465 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-212ENST00000546744 ORM2P19652 201 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 ZNF658BQ4V348 819 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-212ENST00000546744 SLC25A47Q6Q0C1 308 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 C8orf44Q96CB5 159 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 MISP3Q96FF7 219 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 FOXQ1Q9C009 403 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 MYO16Q9Y6X6 1858 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 MEX3AA1L020 520 aaKnown RBP11.05□□□□□ -0.64
PTCH1-212ENST00000546744 C1QCP02747 245 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 KIR2DL1P43626 348 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-212ENST00000546744 KIR2DL2P43627 348 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-212ENST00000546744 ZNF324BQ6AW86 544 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-212ENST00000546744 NR2C2APQ86WQ0 139 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 ZNF645Q8N7E2 425 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 RFESDQ8TAC1 157 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 SEC16AO15027 2179 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 AREGP15514 252 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 METAP1P53582 386 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 PRRX1P54821 245 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 COPS9Q8WXC6 57 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 HDHD3Q9BSH5 251 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-212ENST00000546744 SCNM1Q9BWG6 230 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 TRAV39A0A0B4J263 110 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 J3QR06 171 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 HBBP68871 147 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 FGFRL1Q8N441 504 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 LRTM2Q8N967 370 aa11.05□□□□□ -0.64
PTCH1-212ENST00000546744 FOXD3Q9UJU5 478 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-212ENST00000546744 TRAV9-2A0A087WT02 112 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 CENPVL1A0A0U1RR11 272 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 HYPMO75409 117 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 WDR31Q8NA23 367 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 AMELYQ99218 206 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 GABRG3Q99928 467 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 GNB4Q9HAV0 340 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 CEACAM3P40198 252 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 RELQ04864 619 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-212ENST00000546744 TGIF1Q15583 401 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 Q6AWC8 147 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 OR2M3Q8NG83 312 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 CTHRC1Q96CG8 243 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 ST20Q9HBF5 79 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 LHX9Q9NQ69 397 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms