RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 M0R1X1 148 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 NUPL2O15504 423 aaKnown RBP9.89□□□□□ -0.83
CCDC38-202ENST00000546386 CLDN1O95832 211 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 CD55P08174 381 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 P2RX3P56373 397 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 THOC7Q6I9Y2 204 aaKnown RBP9.89□□□□□ -0.83
CCDC38-202ENST00000546386 ST6GALNAC3Q8NDV1 305 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 LINC00052Q96N35 136 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 ABHD14AQ9BUJ0 271 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 CALYQ9NYX4 217 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 CSPG4Q6UVK1 2322 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 TANC2Q9HCD6 1990 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 TRAV3A0A0B4J244 114 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 METTL15P1P0C7V9 234 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 S100A1P23297 94 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 UCP1P25874 307 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 CDKN1AP38936 164 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 MORN2Q502X0 79 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 NMSQ5H8A3 153 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 BAP18Q8IXM2 172 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 OR4D5Q8NGN0 318 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 CLN8Q9UBY8 286 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 TUBD1Q9UJT1 453 aa9.89□□□□□ -0.83
CCDC38-202ENST00000546386 TRBV6-6A0A0A6YYG2 114 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 ZNF705EA8MWA4 302 aaPredicted RBP9.88□□□□□ -0.83
CCDC38-202ENST00000546386 PRSS44E7EML9 344 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 MGST3O14880 152 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 SOD3P08294 240 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 C4BPBP20851 252 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 GPR12P47775 334 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 C17orf58Q2M2W7 97 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 CLLU1Q5K131 121 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 SPANXN5Q5MJ07 72 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 STUMQ69YW2 141 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 FAM185AQ8N0U4 392 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 NUP37Q8NFH4 326 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 SNX22Q96L94 193 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 TMEM56Q96MV1 263 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 SLC25A32Q9H2D1 315 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 TMEM106BQ9NUM4 274 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 CTSZQ9UBR2 303 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 SLC25A10Q9UBX3 287 aaPredicted RBP9.88□□□□□ -0.83
CCDC38-202ENST00000546386 FAM96BQ9Y3D0 163 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 TMEM56-RWDD3S4R434 201 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 A0A1W2PRD5 423 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 A0A1W2PRF3 423 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 A0A1W2PRM7 423 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 H0Y980 276 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 VDAC1P21796 283 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 LOXL3P58215 753 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 AANATQ16613 207 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 CT45A1Q5HYN5 189 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 SHEQ5VZ18 495 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 OR8G2PQ6IF36 304 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 OR5C1Q8NGR4 320 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 CT45A3Q8NHU0 189 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 DHRS9Q9BPW9 319 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 PRORYQ9H606 182 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 TAS2R3Q9NYW6 316 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 TMED3Q9Y3Q3 217 aa9.88□□□□□ -0.83
CCDC38-202ENST00000546386 IGHV3-72A0A0B4J1Y9 119 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 DVL1O14640 695 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 RPL31P62899 125 aaKnown RBP9.87□□□□□ -0.83
CCDC38-202ENST00000546386 ZNF345Q14585 488 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 ODF3L1Q8IXM7 274 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 ZNF645Q8N7E2 425 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 HELZ2Q9BYK8 2649 aaKnown RBP9.87□□□□□ -0.83
CCDC38-202ENST00000546386 PPIAL4EA0A075B759 164 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 PPIAL4DF5H284 164 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 IFNL4K9M1U5 179 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 RNF224P0DH78 156 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 PPIAL4FP0DN26 164 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 DEFA4P12838 97 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 VAMP2P63027 116 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 ESCO2Q56NI9 601 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 PLEKHF2Q9H8W4 249 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 RNF115Q9Y4L5 304 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 PPIAL4AQ9Y536 164 aa9.87□□□□□ -0.83
CCDC38-202ENST00000546386 NOTCH2Q04721 2471 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 TMEM178BH3BS89 294 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 B3GALNT1O75752 331 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 PET100P0DJ07 73 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 TNFRSF1AP19438 455 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 S100GP29377 79 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 DYNLT3P51808 116 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 EWSR1Q01844 656 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCDC38-202ENST00000546386 MOB1BQ7L9L4 216 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 ZNF295-AS1Q8N0V1 137 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 OR2C3Q8N628 320 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 AQP10Q96PS8 301 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 HINT2Q9BX68 163 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 ZNF665Q9H7R5 613 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 TRGV10A0A0A0MS01 117 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 IGHV1-69-2A0A0G2JMI3 117 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 MED6O75586 246 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 APELAP0DMC3 54 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 TPT1P13693 172 aaKnown RBP9.86□□□□□ -0.83
CCDC38-202ENST00000546386 APOBEC3AP31941 199 aaPredicted RBP9.86□□□□□ -0.83
CCDC38-202ENST00000546386 MZT1Q08AG7 82 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 ZNF616Q08AN1 781 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms