RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 GDF1P27539 372 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 GPX4P36969 197 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-225ENST00000545920 TAS2R60P59551 318 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 ERVK11-1P61568 191 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 GNB2P62879 340 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 RUNX1Q01196 453 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 TNFRSF9Q07011 255 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 MZT1Q08AG7 82 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 IQCJQ1A5X6 159 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 HLA-BQ31612 363 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 COX19Q49B96 90 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 Q6P435 159 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 SPNS3Q6ZMD2 512 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 PPP1R32Q7Z5V6 425 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 YRDCQ86U90 279 aaKnown RBP5.46□□□□□ -1.54
SNHG1-225ENST00000545920 UBALD2Q8IYN6 164 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF645Q8N7E2 425 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 CPEB3Q8NE35 698 aaKnown RBP5.46□□□□□ -1.54
SNHG1-225ENST00000545920 OR10P1Q8NGE3 313 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 OR4X1Q8NH49 305 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 ABHD5Q8WTS1 349 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 APH1AQ96BI3 265 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 C14orf144Q96I85 54 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 OR4C12Q96R67 309 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 DDA1Q9BW61 102 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 GPR61Q9BZJ8 451 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF665Q9H7R5 613 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 RAB9BQ9NP90 201 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 C19orf73Q9NVV2 129 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF581Q9P0T4 197 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 ERRFI1Q9UJM3 462 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-225ENST00000545920 LY96Q9Y6Y9 160 aa5.46□□□□□ -1.54
SNHG1-225ENST00000545920 PHF3Q92576 2039 aaKnown RBP5.46□□□□□ -1.54
SNHG1-225ENST00000545920 A0A087X0M5 115 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 A0A1B0GV50 99 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 A0A1B0GX30 115 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 TMEM30CPA0ZSE6 113 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 G3V3Y1 287 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 IFNL4K9M1U5 179 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 M0QZK8 103 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 SLC31A2O15432 143 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 WISP2O76076 250 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 CLDN14O95500 239 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 IGKV1-5P01602 117 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 CELA3BP08861 270 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 FABP4P15090 132 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 MDKP21741 143 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-225ENST00000545920 IL2RGP31785 369 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 GALR1P47211 349 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 LHX2P50458 406 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 CEBPGP53567 150 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 ATP5IP56385 69 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-225ENST00000545920 FOXL2P58012 376 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 FOXL1Q12952 345 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF726P1Q15940 193 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 Q3ZCU0 254 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 PDLIM3Q53GG5 364 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-225ENST00000545920 DMRTC1Q5HYR2 192 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 ACTL10Q5JWF8 245 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 DCAF12Q5T6F0 453 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 SLC35E4Q6ICL7 350 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF343Q6P1L6 599 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 LCN15Q6UWW0 184 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 BTNL3Q6UXE8 466 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 MCEMP1Q8IX19 187 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 TDHQ8IZJ6 230 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 FGFRL1Q8N441 504 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 OR2T10Q8NGZ9 312 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 OR52E5Q8NH55 327 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 FGFBP3Q8TAT2 258 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 HSD17B10Q99714 261 aaKnown RBP5.45□□□□□ -1.54
SNHG1-225ENST00000545920 RSG1Q9BU20 258 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 NDUFAF3Q9BU61 184 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 RBM7Q9Y580 266 aaKnown RBP5.45□□□□□ -1.54
SNHG1-225ENST00000545920 URGCP-MRPS24S4R325 110 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 TNRC6AQ8NDV7 1962 aaKnown RBP5.45□□□□□ -1.54
SNHG1-225ENST00000545920 PCDH15Q96QU1 1955 aa5.45□□□□□ -1.54
SNHG1-225ENST00000545920 NCOA6Q14686 2063 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-225ENST00000545920 CENPFP49454 3210 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 TRBV9A0A0B4J1U6 114 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 A0A0G2JRQ6 117 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 OOEPA6NGQ2 149 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 LRRC30A6NM36 301 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 A8MWP6 167 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 C21orf140B9A014 251 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 FNDC10F2Z333 226 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 MLNRO43193 412 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 RBFOX2O43251 390 aaKnown RBP eCLIP5.44□□□□□ -1.54
SNHG1-225ENST00000545920 TRAPPC6AO75865 159 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 TNFSF15O95150 251 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 NXPH2O95156 264 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 CLDN1O95832 211 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 MT-CO2P00403 227 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 IGKV1-39P01597 117 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 AMBPP02760 352 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 IGKV1D-39P04432 117 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 CELA2AP08217 269 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 ADH4P08319 380 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 PATE4P0C8F1 98 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF883P0CG24 379 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms