RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CENPBD1B2RD01 187 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 HMGN4O00479 90 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 PLPP3O14495 311 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 AIM2O14862 343 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 LSM1O15116 133 aaKnown RBP1.85□□□□□ -2.11
SNHG1-224ENST00000545688 NDUFA2O43678 99 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 SYNGR1O43759 233 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 OR2T1O43869 369 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 SMIM24O75264 130 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 GABARAPO95166 117 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 AHSA1O95433 338 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 TSPAN19P0C672 248 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 PGA4P0DJD7 388 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 PGA3P0DJD8 388 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 COX5BP10606 129 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 CXCR1P25024 350 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 STOMP27105 288 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 HMOX2P30519 316 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 SLC6A1P30531 599 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 GRPRP30550 384 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 MYCNOSP40205 109 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 CRATP43155 626 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 TGM4P49221 684 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 RGS6P49758 472 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 ERFP50548 548 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 DYNLT3P51808 116 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 NAB1Q13506 487 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 OR5I1Q13606 314 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 PPP1R7Q15435 360 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 LRRC75BQ2VPJ9 315 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 SLC36A2Q495M3 483 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 PABPC1L2AQ5JQF8 200 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 LDLRAD2Q5SZI1 272 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 C10orf128Q5T292 105 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 MRPL2Q5T653 305 aaKnown RBP1.85□□□□□ -2.11
SNHG1-224ENST00000545688 FAM27BQ5VT28 67 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 TEX36Q5VZQ5 186 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 C10orf99Q6UWK7 81 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 C5orf46Q6UWT4 87 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 LRRC74BQ6ZQY2 392 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF493Q6ZR52 646 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 UTS2BQ765I0 119 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 PDZD9Q8IXQ8 264 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 DYNAPQ8N1N2 210 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 RPP25LQ8N5L8 163 aaKnown RBP1.85□□□□□ -2.11
SNHG1-224ENST00000545688 MIR7-3HGQ8N6C7 128 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 OR4K5Q8NGD3 323 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF420Q8TAQ5 688 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-224ENST00000545688 PYROXD1Q8WU10 500 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 RORBQ92753 470 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 SLC35B4Q969S0 331 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 SGK3Q96BR1 496 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 ROPN1LQ96C74 230 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 ISOC1Q96CN7 298 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 CMBLQ96DG6 245 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 SLC25A44Q96H78 314 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-224ENST00000545688 NARS2Q96I59 477 aaKnown RBP1.85□□□□□ -2.11
SNHG1-224ENST00000545688 TRNT1Q96Q11 434 aaKnown RBP1.85□□□□□ -2.11
SNHG1-224ENST00000545688 NABP2Q9BQ15 211 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 OR51B6Q9H340 312 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 OR51I1Q9H343 314 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 YY1AP1Q9H869 796 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 TMCC3Q9ULS5 477 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 GUCA1BQ9UMX6 200 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 STK38LQ9Y2H1 464 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 TMED5Q9Y3A6 229 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
SNHG1-224ENST00000545688 TNCP24821 2201 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 TRAV36DV7A0A075B6V5 113 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 IGLV1-36A0A0B4J1U3 117 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 A0A1B0GW55 424 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 TCRBV4S1A1TA0A5B7 111 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 C5orf49A4QMS7 147 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 IQCF6A8MYZ5 107 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 C16orf90A8MZG2 172 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 H3BQF6 201 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 M0R1W7 72 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 PGRMC1O00264 195 aaKnown RBP1.84□□□□□ -2.11
SNHG1-224ENST00000545688 HSD17B6O14756 317 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 TIMM8AO60220 97 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-224ENST00000545688 FGF4P08620 206 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 DUX4L2P0CJ85 424 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 DUX4L3P0CJ86 424 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 DUX4L5P0CJ88 424 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 DUX4L6P0CJ89 424 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 DUX4L7P0CJ90 424 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 PAX6P26367 422 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 APLNRP35414 380 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 ANP32AP39687 249 aaKnown RBP1.84□□□□□ -2.11
SNHG1-224ENST00000545688 CD200P41217 278 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 RPS5P46782 204 aaKnown RBP1.84□□□□□ -2.11
SNHG1-224ENST00000545688 CSNK1A1P48729 337 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 SERPINB8P50452 374 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 IL5RAQ01344 420 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 PRB3Q04118 309 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-224ENST00000545688 KLRD1Q13241 179 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 C1DQ13901 141 aaKnown RBP1.84□□□□□ -2.11
SNHG1-224ENST00000545688 GINS1Q14691 196 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 POU2AF1Q16633 256 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 CARD17Q5XLA6 110 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms