RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	SSR3	Q9UNL2	185 aa		10.51	□□□□□ -0.73
POLE-222	ENST00000545015	TRBV6-7	A0A0A0MS04	114 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	IGHV7-81	A0A0B4J1V7	117 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015		A0A0B4J203	849 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	SCGN	O76038	276 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	VDAC1	P21796	283 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	DTYMK	P23919	212 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	CNTFR	P26992	372 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.5	□□□□□ -0.73
POLE-222	ENST00000545015	LIN54	Q6MZP7	749 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	FAM131A	Q6UXB0	335 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	ZNF695	Q8IW36	515 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	MRPL41	Q8IXM3	137 aa	Known RBP	10.5	□□□□□ -0.73
POLE-222	ENST00000545015	RBMXL1	Q96E39	390 aa	Known RBP	10.5	□□□□□ -0.73
POLE-222	ENST00000545015	OR51J1	Q9H342	316 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	WASHC3	Q9Y3C0	194 aa		10.5	□□□□□ -0.73
POLE-222	ENST00000545015	TG	P01266	2768 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	DNAH3	Q8TD57	4116 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	RRH	O14718	337 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	TMEM127	O75204	238 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	RPLP1	P05386	114 aa	Known RBP	10.49	□□□□□ -0.73
POLE-222	ENST00000545015	SLC2A2	P11168	524 aa	Predicted RBP	10.49	□□□□□ -0.73
POLE-222	ENST00000545015	IGLL1	P15814	213 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	GNB3	P16520	340 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	C19orf54	Q5BKX5	351 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	FOXB2	Q5VYV0	432 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.49	□□□□□ -0.73
POLE-222	ENST00000545015	SFXN4	Q6P4A7	337 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	C18orf65	Q6ZTR6	163 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	C8orf86	Q6ZUL3	223 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	KLHL30-AS1	Q8NEE0	82 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	KCTD7	Q96MP8	289 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	GPR61	Q9BZJ8	451 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	OR51E2	Q9H255	320 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	KIAA1456	Q9P272	454 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	ZNF221	Q9UK13	617 aa		10.49	□□□□□ -0.73
POLE-222	ENST00000545015	ATP6V0E1	O15342	81 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	SPDEF	O95238	335 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	IGLV1-40	P01703	118 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	TFAP2A	P05549	437 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	GSTT2	P0CG29	244 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	GSTT2B	P0CG30	244 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	EGFEM1P	Q0D2K5	195 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	IGSF11	Q5DX21	431 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	HACD4	Q5VWC8	232 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	PDPN	Q86YL7	162 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	ZNF383	Q8NA42	475 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	MINDY2	Q8NBR6	621 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	MCRIP2	Q9BUT9	160 aa	Known RBP	10.48	□□□□□ -0.73
POLE-222	ENST00000545015	ATG5	Q9H1Y0	275 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	DCSTAMP	Q9H295	470 aa		10.48	□□□□□ -0.73
POLE-222	ENST00000545015	GSTP1	P09211	210 aa	Known RBP	10.47	□□□□□ -0.73
POLE-222	ENST00000545015	SDC2	P34741	201 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	PITPNA	Q00169	270 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	TAGLN	Q01995	201 aa	Known RBP	10.47	□□□□□ -0.73
POLE-222	ENST00000545015	KIAA0141	Q14154	515 aa	Predicted RBP	10.47	□□□□□ -0.73
POLE-222	ENST00000545015	CDNF	Q49AH0	187 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.47	□□□□□ -0.73
POLE-222	ENST00000545015	TCTEX1D1	Q8N7M0	179 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	OR8U1	Q8NH10	309 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	OR10J5	Q8NHC4	309 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	C4orf3	Q8WVX3	66 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	RAX2	Q96IS3	184 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.47	□□□□□ -0.73
POLE-222	ENST00000545015	DAPK2	Q9UIK4	370 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	RNF150	Q9ULK6	438 aa		10.47	□□□□□ -0.73
POLE-222	ENST00000545015	TRAV41	A0A0B4J266	112 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	SMIM30	A4D0T7	59 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	NUDT19	A8MXV4	375 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	CCL24	O00175	119 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	BET1	O15155	118 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	IGKV1-16	P04430	117 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	CTXN2	P0C2S0	81 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	SNRPB	P14678	240 aa	Known RBP	10.46	□□□□□ -0.73
POLE-222	ENST00000545015	CD36	P16671	472 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	TALDO1	P37837	337 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	CX3CL1	P78423	397 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	NDP	Q00604	133 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	RUNX1	Q01196	453 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	FHL3	Q13643	280 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	ARFRP1	Q13795	201 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	ZNF260	Q3ZCT1	412 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	ZNF562	Q6V9R5	426 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.46	□□□□□ -0.73
POLE-222	ENST00000545015	UBE2E2	Q96LR5	201 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	TSNAX	Q99598	290 aa	Known RBP	10.46	□□□□□ -0.73
POLE-222	ENST00000545015	FBXL15	Q9H469	300 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	SDHAF2	Q9NX18	166 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.46	□□□□□ -0.73
POLE-222	ENST00000545015	NUBP2	Q9Y5Y2	271 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015	ETV7	Q9Y603	341 aa		10.46	□□□□□ -0.73
POLE-222	ENST00000545015		A0A075B6Q4	140 aa		10.45	□□□□□ -0.74
POLE-222	ENST00000545015	IGKV1D-8	A0A087WSZ0	117 aa		10.45	□□□□□ -0.74
POLE-222	ENST00000545015		A0A0A6YYH2	397 aa		10.45	□□□□□ -0.74
POLE-222	ENST00000545015		A6NJ64	397 aa		10.45	□□□□□ -0.74
POLE-222	ENST00000545015		G3V318	75 aa		10.45	□□□□□ -0.74
POLE-222	ENST00000545015		H7C2Y5	167 aa		10.45	□□□□□ -0.74
POLE-222	ENST00000545015		M0R1X1	148 aa		10.45	□□□□□ -0.74
POLE-222	ENST00000545015	APOA2	P02652	100 aa		10.45	□□□□□ -0.74
POLE-222	ENST00000545015	OR8U9	P0C7N5	309 aa		10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms