RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 FER1L6-AS1Q8NA97 138 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 DRAXINQ8NBI3 349 aaPredicted RBP0.85□□□□□ -2.27
YBX3-214ENST00000544501 OR4A15Q8NGL6 344 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 OR10D4PQ8NGN7 298 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 OR4K13Q8NH42 304 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 MITD1Q8WV92 249 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 NELFBQ8WX92 580 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 TMEM131Q92545 1883 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 MAL2Q969L2 176 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 FMC1Q96HJ9 113 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 BIRC8Q96P09 236 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 PITX2Q99697 317 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 ULBP1Q9BZM6 244 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 ZNF436Q9C0F3 470 aaPredicted RBP0.85□□□□□ -2.27
YBX3-214ENST00000544501 MFSD1Q9H3U5 465 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 POMKQ9H5K3 350 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 FAT4Q6V0I7 4981 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 A0A1B0GUL6 1792 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 LOC285556D6RIA3 1793 aa0.85□□□□□ -2.27
YBX3-214ENST00000544501 RTL1A6NKG5 1358 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 NUP155O75694 1391 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 ANKRD30AQ9BXX3 1397 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 DNAH1Q9P2D7 4330 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 MYOM3Q5VTT5 1437 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 VPS8Q8N3P4 1428 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 IGHV2-26A0A0B4J1V2 119 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 TRGV4A0A0C4DH28 118 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 A6NED7 52 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 LOC730098B7Z3J9 87 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 OVOL1O14753 267 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 SH2D1AO60880 128 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 ZMPSTE24O75844 475 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 GUSBP08236 651 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 IFI30P13284 250 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 M6PRP20645 277 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 DEKP35659 375 aaKnown RBP0.84□□□□□ -2.27
YBX3-214ENST00000544501 DEFB103AP81534 67 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 C2orf80Q0P641 193 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 STX4Q12846 297 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 HNRNPA1L2Q32P51 320 aaKnown RBP0.84□□□□□ -2.27
YBX3-214ENST00000544501 SPIN4Q56A73 249 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 ACTL10Q5JWF8 245 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 FAHD1Q6P587 224 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 SLC25A45Q8N413 288 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 SPICQ8N5J4 248 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 OR2V1Q8NHB1 315 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 CLHC1Q8NHS4 586 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 LGALS14Q8TCE9 139 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 CDKL2Q92772 493 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 CIB1Q99828 191 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 B9D2Q9BPU9 175 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 BCL7BQ9BQE9 202 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 COPS4Q9BT78 406 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 BEX2Q9BXY8 128 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 TRIM4Q9C037 500 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 SLC25A31Q9H0C2 315 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 RPUSD1Q9UJJ7 312 aaKnown RBP0.84□□□□□ -2.27
YBX3-214ENST00000544501 VPREB3Q9UKI3 123 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 LINC00588Q9Y4M8 146 aa0.84□□□□□ -2.27
YBX3-214ENST00000544501 COL11A1P12107 1806 aaPredicted RBP0.84□□□□□ -2.28
YBX3-214ENST00000544501 SIP14410 1827 aa0.84□□□□□ -2.28
YBX3-214ENST00000544501 RGPD2P0DJD1 1756 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 DAPK1P53355 1430 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 RTTNQ86VV8 2226 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 SONP18583 2426 aaKnown RBP0.83□□□□□ -2.28
YBX3-214ENST00000544501 TMEM250H0YL14 139 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 M0QXV9 152 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 TP53I11O14683 189 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 ENSAO43768 121 aaKnown RBP0.83□□□□□ -2.28
YBX3-214ENST00000544501 SPOPO43791 374 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 SHOX2O60902 331 aaPredicted RBP0.83□□□□□ -2.28
YBX3-214ENST00000544501 CRTAPO75718 401 aaPredicted RBP0.83□□□□□ -2.28
YBX3-214ENST00000544501 CA2P00918 260 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 IGKV1-16P04430 117 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 GYPCP04921 128 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 RPS12P25398 132 aaKnown RBP0.83□□□□□ -2.28
YBX3-214ENST00000544501 GTF2H1P32780 548 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 PSG4Q00888 419 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 BAXQ07812 192 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 PCOTHQ58A44 107 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 C10orf91Q5T1B1 145 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 NXNL2Q5VZ03 156 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 LAIR2Q6ISS4 152 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 SLC25A25Q6KCM7 469 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 NOXRED1Q6NXP6 359 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 ZNF767PQ75MW2 155 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 MARCH3Q86UD3 253 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 MSRB3Q8IXL7 192 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 ZNF567Q8N184 647 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 ZIC4Q8N9L1 334 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 ASCC1Q8N9N2 400 aaKnown RBP0.83□□□□□ -2.28
YBX3-214ENST00000544501 DNAAF3Q8N9W5 541 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 ACBD4Q8NC06 268 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 OR8G5Q8NG78 346 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 OR52K1Q8NGK4 314 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 LMX1AQ8TE12 382 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 HIST1H2BAQ96A08 127 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 CLDN23Q96B33 292 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 CPB2Q96IY4 423 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 ZNF396Q96N95 335 aaPredicted RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms