RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 NDUFA3O95167 84 aa18.3■□□□□ 0.52
CHFR-222ENST00000544093 TNFAIP8O95379 198 aa18.3■□□□□ 0.52
CHFR-222ENST00000544093 DUS4LO95620 317 aaKnown RBP18.3■□□□□ 0.52
CHFR-222ENST00000544093 ELANEP08246 267 aa18.3■□□□□ 0.52
CHFR-222ENST00000544093 DTYMKP23919 212 aa18.3■□□□□ 0.52
CHFR-222ENST00000544093 PITPNAQ00169 270 aa18.3■□□□□ 0.52
CHFR-222ENST00000544093 C5orf64Q2M2E5 130 aa18.3■□□□□ 0.52
CHFR-222ENST00000544093 CXorf66Q5JRM2 361 aaPredicted RBP18.3■□□□□ 0.52
CHFR-222ENST00000544093 A0A087WXM4 84 aa18.29■□□□□ 0.52
CHFR-222ENST00000544093 TRBV6-7A0A0A0MS04 114 aa18.29■□□□□ 0.52
CHFR-222ENST00000544093 H0YJW9 148 aa18.29■□□□□ 0.52
CHFR-222ENST00000544093 H7C2Y5 167 aa18.29■□□□□ 0.52
CHFR-222ENST00000544093 GSTP1P09211 210 aaKnown RBP18.29■□□□□ 0.52
CHFR-222ENST00000544093 LIN54Q6MZP7 749 aa18.29■□□□□ 0.52
CHFR-222ENST00000544093 REC114Q7Z4M0 266 aa18.29■□□□□ 0.52
CHFR-222ENST00000544093 RNF152Q8N8N0 203 aa18.29■□□□□ 0.52
CHFR-222ENST00000544093 GAB2Q9UQC2 676 aa18.29■□□□□ 0.52
CHFR-222ENST00000544093 ETV7Q9Y603 341 aa18.29■□□□□ 0.52
CHFR-222ENST00000544093 NUDT19A8MXV4 375 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 BET1O15155 118 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 TFAP2AP05549 437 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 GSTT2P0CG29 244 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 GSTT2BP0CG30 244 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 HACD4Q5VWC8 232 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 ZNF695Q8IW36 515 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 RCC1LQ96I51 464 aaKnown RBP18.28■□□□□ 0.52
CHFR-222ENST00000544093 GINS4Q9BRT9 223 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 DCSTAMPQ9H295 470 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 OR51J1Q9H342 316 aa18.28■□□□□ 0.52
CHFR-222ENST00000544093 IGHG4P01861 327 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 APOA2P02652 100 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 CFHR3Q02985 330 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 CDNFQ49AH0 187 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 IGSF11Q5DX21 431 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 PDPNQ86YL7 162 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 CROCCP3Q8IVE0 287 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 KLHL30-AS1Q8NEE0 82 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 TSPAN14Q8NG11 270 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 LGALS14Q8TCE9 139 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 RITA1Q96K30 269 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 RNF150Q9ULK6 438 aa18.27■□□□□ 0.52
CHFR-222ENST00000544093 RRHO14718 337 aa18.26■□□□□ 0.51
CHFR-222ENST00000544093 CTXN2P0C2S0 81 aa18.26■□□□□ 0.51
CHFR-222ENST00000544093 SNRPBP14678 240 aaKnown RBP18.26■□□□□ 0.51
CHFR-222ENST00000544093 CNTFRP26992 372 aa18.26■□□□□ 0.51
CHFR-222ENST00000544093 TAGLNQ01995 201 aaKnown RBP18.26■□□□□ 0.51
CHFR-222ENST00000544093 MXD1Q05195 221 aa18.26■□□□□ 0.51
CHFR-222ENST00000544093 OXLD1Q5BKU9 147 aa18.26■□□□□ 0.51
CHFR-222ENST00000544093 GLDNQ6ZMI3 551 aaPredicted RBP18.26■□□□□ 0.51
CHFR-222ENST00000544093 GPR61Q9BZJ8 451 aa18.26■□□□□ 0.51
CHFR-222ENST00000544093 RHBDL2Q9NX52 303 aa18.26■□□□□ 0.51
CHFR-222ENST00000544093 ZNF230Q9UIE0 474 aaPredicted RBP18.26■□□□□ 0.51
CHFR-222ENST00000544093 A0A0A6YYH2 397 aa18.25■□□□□ 0.51
CHFR-222ENST00000544093 IGHV7-81A0A0B4J1V7 117 aa18.25■□□□□ 0.51
CHFR-222ENST00000544093 A6NJ64 397 aa18.25■□□□□ 0.51
CHFR-222ENST00000544093 SPDEFO95238 335 aa18.25■□□□□ 0.51
CHFR-222ENST00000544093 MYCNOSP40205 109 aa18.25■□□□□ 0.51
CHFR-222ENST00000544093 CDX1P47902 265 aaPredicted RBP18.25■□□□□ 0.51
CHFR-222ENST00000544093 THBS3P49746 956 aa18.25■□□□□ 0.51
CHFR-222ENST00000544093 PLGLAQ15195 96 aa18.25■□□□□ 0.51
CHFR-222ENST00000544093 ZNF660Q6AZW8 331 aaPredicted RBP18.25■□□□□ 0.51
CHFR-222ENST00000544093 TSNAXQ99598 290 aaKnown RBP18.25■□□□□ 0.51
CHFR-222ENST00000544093 OR2D2Q9H210 308 aa18.25■□□□□ 0.51
CHFR-222ENST00000544093 RBM7Q9Y580 266 aaKnown RBP18.25■□□□□ 0.51
CHFR-222ENST00000544093 TGP01266 2768 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 PROP1O75360 226 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 OR8U9P0C7N5 309 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 GNG2P59768 71 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 IDNKQ5T6J7 187 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 C8orf86Q6ZUL3 223 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 LINC00482Q8N8I6 264 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 OR8U1Q8NH10 309 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 RBMXL1Q96E39 390 aaKnown RBP18.24■□□□□ 0.51
CHFR-222ENST00000544093 PARP11Q9NR21 331 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 NECAP2Q9NVZ3 263 aa18.24■□□□□ 0.51
CHFR-222ENST00000544093 M0R1X1 148 aa18.23■□□□□ 0.51
CHFR-222ENST00000544093 ATP6V0E1O15342 81 aa18.23■□□□□ 0.51
CHFR-222ENST00000544093 RPLP1P05386 114 aaKnown RBP18.23■□□□□ 0.51
CHFR-222ENST00000544093 PSMB8P28062 276 aa18.23■□□□□ 0.51
CHFR-222ENST00000544093 CBX3Q13185 183 aa18.23■□□□□ 0.51
CHFR-222ENST00000544093 TCTEX1D1Q8N7M0 179 aa18.23■□□□□ 0.51
CHFR-222ENST00000544093 ZNF383Q8NA42 475 aa18.23■□□□□ 0.51
CHFR-222ENST00000544093 DRAXINQ8NBI3 349 aaPredicted RBP18.23■□□□□ 0.51
CHFR-222ENST00000544093 MAFIPQ8WZ33 124 aa18.23■□□□□ 0.51
CHFR-222ENST00000544093 FLYWCH2Q96CP2 140 aaKnown RBP18.23■□□□□ 0.51
CHFR-222ENST00000544093 MCRIP2Q9BUT9 160 aaKnown RBP18.23■□□□□ 0.51
CHFR-222ENST00000544093 RNF167Q9H6Y7 350 aa18.23■□□□□ 0.51
CHFR-222ENST00000544093 TRAV41A0A0B4J266 112 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 AIREO43918 545 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 CLEC2LP0C7M8 214 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 IGLL1P15814 213 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 ZNF260Q3ZCT1 412 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 TMEM65Q6PI78 240 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 ETV3LQ6ZN32 361 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 MRPL41Q8IXM3 137 aaKnown RBP18.22■□□□□ 0.51
CHFR-222ENST00000544093 H1FOOQ8IZA3 346 aaPredicted RBP18.22■□□□□ 0.51
CHFR-222ENST00000544093 ADTRPQ96IZ2 230 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 ST6GALNAC5Q9BVH7 336 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 FBXL15Q9H469 300 aa18.22■□□□□ 0.51
CHFR-222ENST00000544093 SDHAF2Q9NX18 166 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms