RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 LINC00869P0C866 280 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 UCP3P55916 312 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 SLC22A18ASQ8N1D0 253 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 CTHRC1Q96CG8 243 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 DLL1O00548 723 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 REG1BP48304 166 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 P2RY6Q15077 328 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 TPRX1Q8N7U7 411 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 OR52M1Q8NGK5 317 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 KCNMB2Q9Y691 235 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 IGHMP01871 453 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 C12orf54Q6X4T0 127 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 RHOVQ96L33 236 aa11.31□□□□□ -0.6
TNC-212ENST00000542877 TMEM14DPA8MWL7 114 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 J3KRW8 73 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 APELAP0DMC3 54 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 DDTP30046 118 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 FAM209BQ5JX69 171 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 FAM214BQ7L5A3 538 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 LSM10Q969L4 123 aaKnown RBP11.3□□□□□ -0.6
TNC-212ENST00000542877 UQCR10Q9UDW1 63 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 NMUP48645 174 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 SLC35B1P78383 322 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 RIPPLY2Q5TAB7 128 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 POC1AQ8NBT0 407 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 MRPL18Q9H0U6 180 aaKnown RBP11.3□□□□□ -0.6
TNC-212ENST00000542877 IGKV1D-42A0A075B6H8 117 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 ID1P41134 155 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 MESP2Q0VG99 397 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 Q5BKY6 102 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 DLL3Q9NYJ7 618 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 C4orf51C9J302 202 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 AGAP20933 346 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 ERVFRD-1P60508 538 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 RELBQ01201 579 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 TMEM187Q14656 261 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 SMIM12Q96EX1 92 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 RARRES2Q99969 163 aa11.3□□□□□ -0.6
TNC-212ENST00000542877 IGHV3-21A0A0B4J1V1 117 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 OR4C46A6NHA9 309 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 AMY1AP04745 511 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 TWIST1Q15672 202 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 ADAMTSL1Q8N6G6 1762 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 NPIPB13A6NJU9 1138 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 NPIPB4C9JG80 1138 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
TNC-212ENST00000542877 TNFRSF9Q07011 255 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 UNC119Q13432 240 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 IZUMO4Q1ZYL8 232 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 MIC13Q5XKP0 118 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 SMIM8Q96KF7 97 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 COL24A1Q17RW2 1714 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 LOC389332A0A1B0GUA5 103 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 M0R3E3 92 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 HOXD4P09016 255 aaPredicted RBP11.29□□□□□ -0.6
TNC-212ENST00000542877 COX5BP10606 129 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
TNC-212ENST00000542877 CCL13Q99616 98 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 SDHCQ99643 169 aaPredicted RBP11.29□□□□□ -0.6
TNC-212ENST00000542877 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
TNC-212ENST00000542877 TMEM238LA0A1B0GVL6 79 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 A6NJY4 79 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 GLIPR1P48060 266 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 TFF2Q03403 129 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 WNT2BQ93097 391 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 HIST1H2BAQ96A08 127 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 PRDM14Q9GZV8 571 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 DMRT1Q9Y5R6 373 aa11.29□□□□□ -0.6
TNC-212ENST00000542877 H3BVH4 76 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 CEBPDP49716 269 aaPredicted RBP11.28□□□□□ -0.6
TNC-212ENST00000542877 SNAI3Q3KNW1 292 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 ZNF841Q6ZN19 808 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 MMD2Q8IY49 270 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 ZNF441Q8N8Z8 693 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 KBTBD11O94819 623 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 HSPE1P61604 102 aaKnown RBP11.28□□□□□ -0.6
TNC-212ENST00000542877 KCNMB1Q16558 191 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 QTRT1Q9BXR0 403 aaKnown RBP11.28□□□□□ -0.6
TNC-212ENST00000542877 HSPB7Q9UBY9 170 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 PGPA6NDG6 321 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 GAGE10A6NGK3 116 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 EIF3GO75821 320 aaKnown RBP eCLIP11.28□□□□□ -0.6
TNC-212ENST00000542877 LEPROTL1O95214 131 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 RNF224P0DH78 156 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 FOXL2P58012 376 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 IGLV3-21P80748 117 aaPredicted RBP11.28□□□□□ -0.6
TNC-212ENST00000542877 SPSB4Q96A44 273 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 C1orf185Q5T7R7 199 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 OR4A5Q8NH83 315 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 GPR61Q9BZJ8 451 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 SH3BGRL3Q9H299 93 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
TNC-212ENST00000542877 TRBV9A0A0B4J1U6 114 aa11.27□□□□□ -0.6
TNC-212ENST00000542877 FGF5P12034 268 aa11.27□□□□□ -0.6
TNC-212ENST00000542877 MAS1LP35410 378 aa11.27□□□□□ -0.6
TNC-212ENST00000542877 OR8G5Q8NG78 346 aa11.27□□□□□ -0.6
TNC-212ENST00000542877 C19orf24Q9BVV8 132 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms