RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 DEFB103AP81534 67 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 IL5RAQ01344 420 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 PSG5Q15238 335 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 TAF1AQ15573 450 aaPredicted RBP2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 SPANXN3Q5MJ09 141 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 C9orf64Q5T6V5 341 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 ARL9Q6T311 187 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 KRTAP7-1Q8IUC3 87 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 SLC34A3Q8N130 599 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 LFNGQ8NES3 379 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 OR8D4Q8NGM9 314 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 OR2T4Q8NH00 348 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 OR4K15Q8NH41 348 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 OR51Q1Q8NH59 317 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 NT5CQ8TCD5 201 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF431Q8TF32 576 aaPredicted RBP2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 DNAJB3Q8WWF6 145 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 HGDQ93099 445 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM203Q969S6 136 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 WDR34Q96EX3 536 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 C16orf74Q96GX8 76 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 TEX37Q96LM6 180 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 GPR22Q99680 433 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 RSG1Q9BU20 258 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 SNRNP25Q9BV90 132 aaKnown RBP2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 C1QTNF6Q9BXI9 259 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 OR51E2Q9H255 320 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 POMKQ9H5K3 350 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 DEC1Q9P2X7 70 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 CD84Q9UIB8 345 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 VAX2Q9UIW0 290 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 FBXL3Q9UKT7 428 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 PSG8Q9UQ74 426 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 GON4LQ3T8J9 2241 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 IGKV3D-15A0A087WSY6 115 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 SMIM26A0A096LP01 95 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 IGHV1-69DA0A0B4J2H0 117 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 KIR2DS1A0A191URI9 304 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 LOC100130705A0A1B0GUX0 176 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 C1orf196B1AJZ1 125 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 H0Y9J4 135 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 J3QT63 122 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CRXO43186 299 aaPredicted RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CHST10O43529 356 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ORC5O43913 435 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 MFSD11O43934 449 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 HPGDSO60760 199 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 GGCTO75223 188 aaKnown RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ATG12O94817 140 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CFDP00746 253 aaPredicted RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 APOC3P02656 99 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CRYBA1P05813 215 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 MMP7P09237 267 aaPredicted RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CRISP2P16562 243 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF25P17030 456 aaPredicted RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 DTYMKP23919 212 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 HSD11B1P28845 292 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CD70P32970 193 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 MAGEA2P43356 314 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 IDH3GP51553 393 aaPredicted RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CAV2P51636 162 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 FOXA1P55317 472 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 SYNJ2BPP57105 145 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 RAB38P57729 211 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 MTPNP58546 118 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 TAS2R31P59538 309 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CXCR4P61073 352 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ARF6P62330 175 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 REEP5Q00765 189 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 EMX2Q04743 252 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CD164Q04900 197 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 MPPED2Q15777 294 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 PRSS8Q16651 343 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ACTBL2Q562R1 376 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 SDHAF4Q5VUM1 108 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 KHDRBS2Q5VWX1 349 aaKnown RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 SYPL2Q5VXT5 272 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 FBXW9Q5XUX1 488 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 SAXO2Q658L1 398 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 NCBP2-AS2Q69YL0 99 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 LPCAT3Q6P1A2 487 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 MED27Q6P2C8 311 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 HAGHLQ6PII5 290 aaPredicted RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 SCIMPQ6UWF3 145 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ZBTB8OSQ8IWT0 167 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 SVBPQ8N300 66 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 SPICQ8N5J4 248 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CD177Q8N6Q3 437 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ACBD4Q8NC06 268 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF555Q8NEP9 628 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 OR4K17Q8NGC6 315 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 OR2AE1Q8NHA4 323 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 OR5K1Q8NHB7 308 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 NEK7Q8TDX7 302 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 TM4SF18Q96CE8 201 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ZMYND19Q96E35 227 aaPredicted RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 MRPS24Q96EL2 167 aaKnown RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 PITX2Q99697 317 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 HOPXQ9BPY8 73 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms