RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 HOXC5Q00444 222 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 RPL18Q07020 188 aaKnown RBP1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 FUT5Q11128 374 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 CALCOCO2Q13137 446 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 LTC4SQ16873 150 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 IMPG1Q17R60 797 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 C17orf58Q2M2W7 97 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 C15orf32Q32M92 178 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 ACTL10Q5JWF8 245 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC25A30Q5SVS4 291 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 DRAM2Q6UX65 266 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 UNQ9165/PRO28630Q6UXU0 137 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 SSX9Q7RTT3 188 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 TMEM256Q8N2U0 113 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 TCEANCQ8N8B7 351 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR10A7Q8NGE5 316 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR5A2Q8NGI9 324 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 FAM46BQ96A09 425 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 RNF185Q96GF1 192 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 METTL2AQ96IZ6 378 aaKnown RBP1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 NAT9Q9BTE0 207 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 OSBPL10Q9BXB5 764 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 TMEM27Q9HBJ8 222 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 HES4Q9HCC6 221 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 DAZ1Q9NQZ3 744 aaKnown RBP1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 IDI2-AS1Q9NZ38 188 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 IKZF2Q9UKS7 526 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 STK38LQ9Y2H1 464 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 GOLT1BQ9Y3E0 138 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 N6AMT1Q9Y5N5 214 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 TRBV9A0A0B4J1U6 114 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 RNF103-CHMP3A0A140T963 221 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 A0A1B0GVG6 124 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 ODAMA1E959 279 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR5B21A6NL26 309 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 KNCNA6PVL3 124 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 A8MU10 97 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF701M0R085 212 aaPredicted RBP1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 OGG1O15527 345 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 AHCYL1O43865 530 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 NDUFB4O95168 129 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 CA2P00918 260 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 IL1AP01583 271 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 VIMP08670 466 aaKnown RBP1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR9G9P0C7N8 305 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LAMP1P11279 417 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 PSMB6P28072 239 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 HPCAL1P37235 193 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 AQP2P41181 271 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR3A1P47881 315 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 UBE2D1P51668 147 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 CDC42P60953 191 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 RPL27P61353 136 aaKnown RBP1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 DHODHQ02127 395 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LIPEQ05469 1076 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 SCN1BQ07699 218 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 PJVKQ0ZLH3 352 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 UNC119Q13432 240 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 SNX1Q13596 522 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 SYPL1Q16563 259 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 AGKQ53H12 422 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 UNC50Q53HI1 259 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LCN1P1Q5VSP4 162 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 OTPQ5XKR4 325 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 SIGIRRQ6IA17 410 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LYPD5Q6UWN5 251 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 SHFQ7M4L6 423 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 GSTA5Q7RTV2 222 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF554Q86TJ5 538 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 NOXA1Q86UR1 476 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF573Q86YE8 665 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 ENTHD1Q8IYW4 607 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LRRC34Q8IZ02 419 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 ELMOD2Q8IZ81 293 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LINC00471Q8N535 108 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LINC00311Q8N616 119 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 C8orf31Q8N9H6 132 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 INO80EQ8NBZ0 244 aaPredicted RBP1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR10J6PQ8NGY7 276 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 Q8TAT8 98 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 BAALCQ8WXS3 180 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 RFT1Q96AA3 541 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZC2HC1AQ96GY0 325 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 REEP6Q96HR9 211 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 RNF2Q99496 336 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LITAFQ99732 161 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 SPIN2AQ99865 258 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 SPIN2BQ9BPZ2 258 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 C7orf50Q9BRJ6 194 aaKnown RBP1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 PPDPFQ9H3Y8 114 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 RHOJQ9H4E5 214 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 RERGLQ9H628 205 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LINC00574Q9H8X3 128 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 NEK6Q9HC98 313 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 NRN1Q9NPD7 142 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 IL1RAPQ9NPH3 570 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 PAK1IP1Q9NWT1 392 aaPredicted RBP1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 PRO0461Q9UI25 63 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 PCTPQ9UKL6 214 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms