RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RYDENQ9NUL5 291 aaKnown RBP13.71□□□□□ -0.21
VARS2-212ENST00000542001 NCOR2Q9Y618 2525 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 CHD9Q3L8U1 2897 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 NEURL1O76050 574 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 CD55P08174 381 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 SP9P0CG40 484 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 GGNQ86UU5 652 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 ZNF439Q8NDP4 499 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 OR2V2Q96R30 315 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 CFAP54Q96N23 3096 aa13.71□□□□□ -0.22
VARS2-212ENST00000542001 A0A1B0GU03 582 aa13.71□□□□□ -0.22
VARS2-212ENST00000542001 KIAA1324LA8MWY0 1029 aaPredicted RBP13.71□□□□□ -0.22
VARS2-212ENST00000542001 BHLHA15Q7RTS1 189 aaPredicted RBP13.71□□□□□ -0.22
VARS2-212ENST00000542001 ABHD12Q8N2K0 398 aa13.71□□□□□ -0.22
VARS2-212ENST00000542001 TMEM147Q9BVK8 224 aa13.71□□□□□ -0.22
VARS2-212ENST00000542001 FUT9Q9Y231 359 aa13.71□□□□□ -0.22
VARS2-212ENST00000542001 CSPG4Q6UVK1 2322 aa13.71□□□□□ -0.22
VARS2-212ENST00000542001 XKRY2A2RUG3 117 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 FAM90A27PA6NNH2 459 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 OR4P4Q8NGL7 312 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 BLNKQ8WV28 456 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 GPR61Q9BZJ8 451 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 LOC102723996A0A087X1L8 192 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 OOEPA6NGQ2 149 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 SRSF10O75494 262 aaKnown RBP13.7□□□□□ -0.22
VARS2-212ENST00000542001 FTH1P19P0C7X4 201 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 PMS2P11Q13670 270 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 RTL8BQ17RB0 113 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 ITLN1Q8WWA0 313 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 LYRM2Q9NU23 88 aaPredicted RBP13.7□□□□□ -0.22
VARS2-212ENST00000542001 IL36GQ9NZH8 169 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 LINC00587B1AMM8 73 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 FAM157AC9JC47 383 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 PITX3O75364 302 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 PSG7Q13046 419 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 TIGITQ495A1 244 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 MOB3BQ86TA1 216 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 GMPPAQ96IJ6 420 aaPredicted RBP13.7□□□□□ -0.22
VARS2-212ENST00000542001 RBKSQ9H477 322 aa13.7□□□□□ -0.22
VARS2-212ENST00000542001 YLPM1P49750 1951 aaKnown RBP13.7□□□□□ -0.22
VARS2-212ENST00000542001 H0Y980 276 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 PLAUP00749 431 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 HLA-GP17693 338 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 MPV17P39210 176 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 IL22RA2Q969J5 263 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 KIAA1456Q9P272 454 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 ALPK3Q96L96 1907 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 MBP02144 154 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 ZFP36L1Q07352 338 aaKnown RBP13.69□□□□□ -0.22
VARS2-212ENST00000542001 PLPPR1Q8TBJ4 325 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 FOXD3Q9UJU5 478 aaPredicted RBP13.69□□□□□ -0.22
VARS2-212ENST00000542001 OPRK1P41145 380 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 LHX2P50458 406 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 OR5P3Q8WZ94 311 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 RHOVQ96L33 236 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 ZNF835Q9Y2P0 537 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 GYPAP02724 150 aa13.69□□□□□ -0.22
VARS2-212ENST00000542001 CRYGSP22914 178 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 MISP3Q96FF7 219 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 NEIL1Q96FI4 390 aaPredicted RBP13.68□□□□□ -0.22
VARS2-212ENST00000542001 MALRD1Q5VYJ5 2156 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 ORM2P19652 201 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 CLDN18P56856 261 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 LHFPL1Q86WI0 220 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 SGK494Q96LW2 274 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 FAM117AQ9C073 453 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 CTDSP1Q9GZU7 261 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 VAX2Q9UIW0 290 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 TRAPPC1Q9Y5R8 145 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 PGA5P0DJD9 388 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 PRB4P10163 310 aaPredicted RBP13.68□□□□□ -0.22
VARS2-212ENST00000542001 BCL2P10415 239 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 KRTDAPP60985 99 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 RPS23P62266 143 aaKnown RBP13.68□□□□□ -0.22
VARS2-212ENST00000542001 ZNF385CQ66K41 422 aaPredicted RBP13.68□□□□□ -0.22
VARS2-212ENST00000542001 LIME1Q9H400 295 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 SLC35D1Q9NTN3 355 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 CLCF1Q9UBD9 225 aa13.68□□□□□ -0.22
VARS2-212ENST00000542001 C12orf77C9JDV5 145 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 CCL1P22362 96 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 ERHP84090 104 aaKnown RBP13.67□□□□□ -0.22
VARS2-212ENST00000542001 RTP5Q14D33 572 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 RPL39P5Q59GN2 51 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 MIC13Q5XKP0 118 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 FAM53AQ6NSI3 398 aaPredicted RBP13.67□□□□□ -0.22
VARS2-212ENST00000542001 POM121Q96HA1 1249 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 WIPI2Q9Y4P8 454 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 NDUFB4O95168 129 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 PMCHP20382 165 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 ARSJQ5FYB0 599 aaPredicted RBP13.67□□□□□ -0.22
VARS2-212ENST00000542001 FAM216AQ8WUB2 273 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 TAF15Q92804 592 aaKnown RBP eCLIP13.67□□□□□ -0.22
VARS2-212ENST00000542001 C1orf147Q96MC9 270 aaPredicted RBP13.67□□□□□ -0.22
VARS2-212ENST00000542001 IGLV3-32A0A0A0MS00 114 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 C9JQL5 133 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 GAMTQ14353 236 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 GALNT14Q96FL9 552 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 POM121L2Q96KW2 1035 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 C1QTNF5Q9BXJ0 243 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms