RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 TCTEX1D1Q8N7M0 179 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 NKAIN3Q8N8D7 197 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 ZNF383Q8NA42 475 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 ZNF555Q8NEP9 628 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 GRPEL2Q8TAA5 225 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 SETD6Q8TBK2 473 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 CYGBQ8WWM9 190 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 ISOC1Q96CN7 298 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 UQCC2Q9BRT2 126 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 C11orf54Q9H0W9 315 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 PIPOXQ9P0Z9 390 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 RNF150Q9ULK6 438 aa11.8□□□□□ -0.52
CLSTN3-213ENST00000541953 IGKV1-6A0A0C4DH72 117 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 ANKRD34BA5PLL1 514 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 A8MZ25 164 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 RAB29O14966 203 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 ARSBP15848 533 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 HAGHQ16775 308 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 FLYWCH2Q96CP2 140 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 NEDD4LQ96PU5 975 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 TMEM59Q9BXS4 323 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 STEAP1Q9UHE8 339 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 STUB1Q9UNE7 303 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 ERGIC3Q9Y282 383 aa11.79□□□□□ -0.52
CLSTN3-213ENST00000541953 IRGMA1A4Y4 181 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 SOCS1O15524 211 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 VEGFCP49767 419 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 PYHIN1Q6K0P9 492 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 ZNF562Q6V9R5 426 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 AHSA2Q719I0 299 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 ANKRD13BQ86YJ7 626 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 OR5T1Q8NG75 326 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 C5orf30Q96GV9 206 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 GFI1Q99684 422 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 TM2D1Q9BX74 207 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 CHMP1AQ9HD42 196 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 ABRACLQ9P1F3 81 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 AK3Q9UIJ7 227 aa11.78□□□□□ -0.52
CLSTN3-213ENST00000541953 TMEM14DPA8MWL7 114 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 SLC25A17O43808 307 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 IGLV2-23P01705 113 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 TFAP2AP05549 437 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 SCTP09683 121 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 WNT4P56705 351 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 SYNJ2BPP57105 145 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 HLA-DRB3P79483 266 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 TMEM267Q0VDI3 215 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 KLF5Q13887 457 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 FXYD3Q14802 87 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 C1orf100Q5SVJ3 147 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 POC5Q8NA72 575 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 FAM110AQ9BQ89 295 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 LPAR5Q9H1C0 372 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 SLA2Q9H6Q3 261 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 CHCHD3Q9NX63 227 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 GHRLQ9UBU3 117 aa11.77□□□□□ -0.53
CLSTN3-213ENST00000541953 EFCAB10A6NFE3 127 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 RBBP9O75884 186 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 CD1AP06126 327 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 APELAP0DMC3 54 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 CPEP16870 476 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 MC5RP33032 325 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 CEACAM6P40199 344 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 TAS2R43P59537 309 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 MRGPRG-AS1Q2M3A8 158 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 ACSM3Q53FZ2 586 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 RBM48Q5RL73 367 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 SGPP2Q8IWX5 399 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 ELOVL1Q9BW60 279 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 ZNF355PQ9NSJ1 428 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 PSORS1C1Q9UIG5 152 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 LRRC42Q9Y546 428 aa11.76□□□□□ -0.53
CLSTN3-213ENST00000541953 ITGB1BP1O14713 200 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 SLC22A1O15245 554 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 CRYGBP07316 175 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 CSN3P07498 182 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 CD3GP09693 182 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 TMEM50BP56557 158 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 RPS16P62249 146 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 DYRK1AQ13627 763 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 P2RY14Q15391 338 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 NANOGP1Q8N7R0 232 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 OR9G4Q8NGQ1 327 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 TMED9Q9BVK6 235 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 RANGRFQ9HD47 186 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 KMT2AQ03164 3969 aa11.75□□□□□ -0.53
CLSTN3-213ENST00000541953 TRBV6-6A0A0A6YYG2 114 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 MYL12BO14950 172 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 SPDEFO95238 335 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 UBBP0CG47 229 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 CD37P11049 281 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 EDN2P20800 178 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 PLA2G7Q13093 441 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 MOB1BQ7L9L4 216 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 PTX4Q96A99 478 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 RNF5Q99942 180 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 WFDC10AQ9H1F0 79 aa11.74□□□□□ -0.53
CLSTN3-213ENST00000541953 Q9N2K0 584 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms