RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 MPC1Q9Y5U8 109 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 CTXN2P0C2S0 81 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 SPRNQ5BIV9 151 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 Q6P435 159 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 Q6ZSR3 168 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 OR13A1Q8NGR1 328 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 ARV1Q9H2C2 271 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 DOK5Q9P104 306 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 TNRC6AQ8NDV7 1962 aaKnown RBP11.4□□□□□ -0.58
PTPN1-202ENST00000541713 LRP5LA4QPB2 252 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 FABP4P15090 132 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 RAB5CP51148 216 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 KRTAP27-1Q3LI81 207 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 CLDND2Q8NHS1 167 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 TVP23CQ96ET8 276 aa11.4□□□□□ -0.58
PTPN1-202ENST00000541713 C5orf52A6NGY3 159 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 OR5B21A6NL26 309 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 M0R296 226 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 IGKV1D-33P01593 117 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 IGKV1-33P01594 117 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 FGF7P21781 194 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 COL10A1Q03692 680 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 PRB3Q04118 309 aaPredicted RBP11.4□□□□□ -0.59
PTPN1-202ENST00000541713 ZNF610Q8N9Z0 462 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 SMIM7Q9BQ49 75 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 TMEM9BQ9NQ34 198 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 RALYQ9UKM9 306 aaKnown RBP11.4□□□□□ -0.59
PTPN1-202ENST00000541713 WNK2Q9Y3S1 2297 aa11.4□□□□□ -0.59
PTPN1-202ENST00000541713 TRAV38-1A0A0B4J264 116 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 MLNRO43193 412 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 IGLV2-14P01704 120 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 TRIP6Q15654 476 aaKnown RBP11.39□□□□□ -0.59
PTPN1-202ENST00000541713 OR51G1Q8NGK1 321 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 TECTBQ96PL2 329 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 ZNRD1Q9P1U0 126 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 A0A1W2PPQ1 181 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 ZNF737O75373 536 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 IFNA10P01566 189 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 PGA5P0DJD9 388 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 MYOD1P15172 320 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 CHRNA7P36544 502 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 HMGN3Q15651 99 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 RPL39P5Q59GN2 51 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 C9orf106Q8NAJ2 232 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 LRRC29Q8WV35 223 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 KIAA1456Q9P272 454 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 ATPIF1Q9UII2 106 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 AP4M1O00189 453 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 GCH1P30793 250 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 IL24Q13007 206 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 RNF212Q495C1 297 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 H2BFWTQ7Z2G1 175 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 LINC00470Q9BZP3 86 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 IFT22Q9H7X7 185 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 GSN-AS1Q9NRJ2 163 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 WASF3Q9UPY6 502 aa11.39□□□□□ -0.59
PTPN1-202ENST00000541713 M0R1B8 84 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 PRB4P10163 310 aaPredicted RBP11.38□□□□□ -0.59
PTPN1-202ENST00000541713 S100A2P29034 98 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 ZNF525Q8N782 197 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 LFNGQ8NES3 379 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 SSMEM1Q8WWF3 244 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 S100PBPQ96BU1 408 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 ELOVL1Q9BW60 279 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 NCOR2Q9Y618 2525 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 ODAMA1E959 279 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 GNG10P50151 68 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 FFAR4Q5NUL3 377 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 FAM122AQ96E09 287 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 RHOVQ96L33 236 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 CABLES2Q9BTV7 478 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 GPR87Q9BY21 358 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 POLDIP2Q9Y2S7 368 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 ZNF292O60281 2723 aa11.38□□□□□ -0.59
PTPN1-202ENST00000541713 LINC00473A8K010 186 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 IFNL4K9M1U5 179 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 DFFBO76075 338 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 CYC1P08574 325 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 MDH2P40926 338 aaKnown RBP11.37□□□□□ -0.59
PTPN1-202ENST00000541713 HBG1P69891 147 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 HBG2P69892 147 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 DUX4L9Q6RFH8 374 aaPredicted RBP11.37□□□□□ -0.59
PTPN1-202ENST00000541713 RPP25LQ8N5L8 163 aaKnown RBP11.37□□□□□ -0.59
PTPN1-202ENST00000541713 TMEM37Q8WXS4 190 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 CHD8Q9HCK8 2581 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 PAGE4O60829 102 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 HOXA6P31267 233 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 NKX6-1P78426 367 aaPredicted RBP11.37□□□□□ -0.59
PTPN1-202ENST00000541713 ELOBQ15370 118 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 ACSM6Q6P461 480 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 MUCL1Q96DR8 90 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 LIN7CQ9NUP9 197 aaKnown RBP11.37□□□□□ -0.59
PTPN1-202ENST00000541713 LAMP3Q9UQV4 416 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 A0A1B0GU03 582 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 M0R1X1 148 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 ASPHD1Q5U4P2 390 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 ZNF709Q8N972 641 aa11.37□□□□□ -0.59
PTPN1-202ENST00000541713 C5orf30Q96GV9 206 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms