RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 FIP1L1Q6UN15 594 aaKnown RBP8.85□□□□□ -0.99
CHFR-219ENST00000541341 SPNS3Q6ZMD2 512 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.85□□□□□ -0.99
CHFR-219ENST00000541341 THNSL2Q86YJ6 484 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 DOLPP1Q86YN1 238 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 LILRB2Q8N423 598 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 OR10G3Q8NGC4 313 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 OR2T10Q8NGZ9 312 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 ABHD5Q8WTS1 349 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 FAM216AQ8WUB2 273 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 MEGF10Q96KG7 1140 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 HIST1H2AAQ96QV6 131 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 TP53RKQ96S44 253 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 NEU1Q99519 415 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 SMIM7Q9BQ49 75 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 RBM24Q9BX46 236 aaKnown RBP8.85□□□□□ -0.99
CHFR-219ENST00000541341 MAP1LC3BQ9GZQ8 125 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 PROK2Q9HC23 129 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 KCNIP2Q9NS61 270 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 ZNF835Q9Y2P0 537 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 ZFHX3Q15911 3703 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 DNAJC13O75165 2243 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 IGKV1D-8A0A087WSZ0 117 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 CTXND1A0A1B0GTU2 59 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 F6UZH7 168 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 PHOX2AO14813 284 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 SYNGR2O43760 224 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 ZNF737O75373 536 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 PFN1P07737 140 aaKnown RBP8.84□□□□□ -0.99
CHFR-219ENST00000541341 GZMBP10144 247 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 CCL3P10147 92 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 COX5BP10606 129 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 CDAP32320 146 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 GALR1P47211 349 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 RAC1P63000 192 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 KRTAP27-1Q3LI81 207 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 OTPQ5XKR4 325 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 CARD17Q5XLA6 110 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 RPRMLQ8N4K4 120 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 ZNF709Q8N972 641 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 TMEM178AQ8NBL3 297 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 OR4X1Q8NH49 305 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 POC1BQ8TC44 478 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 CA5BP1Q8WTZ4 195 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 SPSB4Q96A44 273 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 NABP1Q96AH0 204 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 TMEM68Q96MH6 324 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 PRDM14Q9GZV8 571 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 GPR173Q9NS66 373 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 RNF115Q9Y4L5 304 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 URGCP-MRPS24S4R325 110 aa8.84□□□□□ -0.99
CHFR-219ENST00000541341 A0A1B0GV90 55 aa8.83□□□□□ -1
CHFR-219ENST00000541341 CEBPZOSA8MTT3 80 aa8.83□□□□□ -1
CHFR-219ENST00000541341 SYNGR3O43761 229 aa8.83□□□□□ -1
CHFR-219ENST00000541341 CYTIPO60759 359 aa8.83□□□□□ -1
CHFR-219ENST00000541341 NAPSAO96009 420 aa8.83□□□□□ -1
CHFR-219ENST00000541341 P04436 131 aa8.83□□□□□ -1
CHFR-219ENST00000541341 LINC00614P0C842 121 aa8.83□□□□□ -1
CHFR-219ENST00000541341 COX5AP20674 150 aa8.83□□□□□ -1
CHFR-219ENST00000541341 MEOX1P50221 254 aa8.83□□□□□ -1
CHFR-219ENST00000541341 RAC3P60763 192 aa8.83□□□□□ -1
CHFR-219ENST00000541341 UBE2NP61088 152 aaKnown RBP8.83□□□□□ -1
CHFR-219ENST00000541341 FGF12P61328 243 aa8.83□□□□□ -1
CHFR-219ENST00000541341 RPP30P78346 268 aaKnown RBP8.83□□□□□ -1
CHFR-219ENST00000541341 CCL20P78556 96 aa8.83□□□□□ -1
CHFR-219ENST00000541341 FOXL1Q12952 345 aa8.83□□□□□ -1
CHFR-219ENST00000541341 KRTCAP3Q53RY4 240 aa8.83□□□□□ -1
CHFR-219ENST00000541341 C1orf194Q5T5A4 169 aa8.83□□□□□ -1
CHFR-219ENST00000541341 PLCXD3Q63HM9 321 aa8.83□□□□□ -1
CHFR-219ENST00000541341 ABLIM2Q6H8Q1 611 aa8.83□□□□□ -1
CHFR-219ENST00000541341 CRIP3Q6Q6R5 217 aa8.83□□□□□ -1
CHFR-219ENST00000541341 ZNF66Q6ZN08 573 aa8.83□□□□□ -1
CHFR-219ENST00000541341 TMEM123Q8N131 208 aa8.83□□□□□ -1
CHFR-219ENST00000541341 OR51G1Q8NGK1 321 aa8.83□□□□□ -1
CHFR-219ENST00000541341 OR10J5Q8NHC4 309 aa8.83□□□□□ -1
CHFR-219ENST00000541341 NPRL2Q8WTW4 380 aa8.83□□□□□ -1
CHFR-219ENST00000541341 LHX4Q969G2 390 aa8.83□□□□□ -1
CHFR-219ENST00000541341 ZNF845Q96IR2 970 aaPredicted RBP8.83□□□□□ -1
CHFR-219ENST00000541341 KLHDC3Q9BQ90 382 aa8.83□□□□□ -1
CHFR-219ENST00000541341 MRPL37Q9BZE1 423 aaKnown RBP8.83□□□□□ -1
CHFR-219ENST00000541341 OR51B6Q9H340 312 aa8.83□□□□□ -1
CHFR-219ENST00000541341 SLC7A10Q9NS82 523 aa8.83□□□□□ -1
CHFR-219ENST00000541341 PSENENQ9NZ42 101 aa8.83□□□□□ -1
CHFR-219ENST00000541341 KLF13Q9Y2Y9 288 aaPredicted RBP8.83□□□□□ -1
CHFR-219ENST00000541341 OR2W1Q9Y3N9 320 aa8.83□□□□□ -1
CHFR-219ENST00000541341 ZNF469Q96JG9 3925 aaPredicted RBP8.83□□□□□ -1
CHFR-219ENST00000541341 ZFP92A6NM28 416 aa8.82□□□□□ -1
CHFR-219ENST00000541341 G3V3Y1 287 aa8.82□□□□□ -1
CHFR-219ENST00000541341 TRAPPC2LH3BP13 241 aa8.82□□□□□ -1
CHFR-219ENST00000541341 PRRG2O14669 202 aa8.82□□□□□ -1
CHFR-219ENST00000541341 CBR3O75828 277 aa8.82□□□□□ -1
CHFR-219ENST00000541341 OR7C1O76099 320 aaPredicted RBP8.82□□□□□ -1
CHFR-219ENST00000541341 PGA5P0DJD9 388 aa8.82□□□□□ -1
CHFR-219ENST00000541341 OMGP23515 440 aa8.82□□□□□ -1
CHFR-219ENST00000541341 CNN1P51911 297 aaKnown RBP8.82□□□□□ -1
CHFR-219ENST00000541341 WDR25Q64LD2 544 aaPredicted RBP8.82□□□□□ -1
CHFR-219ENST00000541341 MRPL41Q8IXM3 137 aaKnown RBP8.82□□□□□ -1
CHFR-219ENST00000541341 Q8IYB0 196 aa8.82□□□□□ -1
CHFR-219ENST00000541341 DNAJA3Q96EY1 480 aa8.82□□□□□ -1
CHFR-219ENST00000541341 BSCL2Q96G97 398 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms