RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 RAB12Q6IQ22 244 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 ZNF497Q6ZNH5 498 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 LYPD6Q86Y78 171 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 GAPTQ8N292 157 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 ZFP41Q8N8Y5 198 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 OR8H1Q8NGG4 311 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 OR6M1Q8NGM8 313 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 OR13A1Q8NGR1 328 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 OR10K1Q8NGX5 313 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 OR10X1Q8NGY0 326 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 MRGPRDQ8TDS7 321 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 ARL11Q969Q4 196 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 RBM14Q96PK6 669 aaKnown RBP4.55□□□□□ -1.68
SUDS3-202ENST00000541280 SELENOIQ9C0D9 397 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 CCDC90BQ9GZT6 254 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 RCC2Q9P258 522 aaKnown RBP4.55□□□□□ -1.68
SUDS3-202ENST00000541280 PSG11Q9UQ72 335 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 HILPDAQ9Y5L2 63 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 PEX16Q9Y5Y5 336 aa4.55□□□□□ -1.68
SUDS3-202ENST00000541280 YLPM1P49750 1951 aaKnown RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 COL6A5A8TX70 2615 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 PNMA8CA0A1B0GUJ8 204 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 C15orf65H3BRN8 121 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 SDCBPO00560 298 aaPredicted RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 SLC22A1O15245 554 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 DENRO43583 198 aaKnown RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 MMP23AO75900 390 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 OPN1MWP04001 364 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 HSMCR30P0CW71 290 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 OPN1MW2P0DN77 364 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 OPN1MW3P0DN78 364 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 HTR2CP28335 458 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 VHLP40337 213 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 GPR12P47775 334 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 RAB13P51153 203 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 HTD2P86397 168 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 ZNF816Q0VGE8 651 aaPredicted RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 TBCEQ15813 527 aaPredicted RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 SYT6Q5T7P8 510 aaPredicted RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 CCBE1Q6UXH8 406 aaPredicted RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 IZUMO2Q6UXV1 221 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 OR2W3Q7Z3T1 314 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 CENPVQ7Z7K6 275 aaPredicted RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 LRRTM1Q86UE6 522 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 NDUFA11Q86Y39 141 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 DYNAPQ8N1N2 210 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 COMMD1Q8N668 190 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 OR4F17Q8NGA8 305 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 OR13C5Q8NGS8 318 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 RFESDQ8TAC1 157 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 FCGR1BQ92637 280 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 TOMM40LQ969M1 308 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 GALMQ96C23 342 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 OR4F4Q96R69 305 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 OR5M11Q96RB7 305 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 MGLLQ99685 303 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 NKX3-1Q99801 234 aaPredicted RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 TMED9Q9BVK6 235 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 TM2D1Q9BX74 207 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 GON7Q9BXV9 100 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 PPIL3Q9H2H8 161 aaKnown RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 ZNF702PQ9H963 129 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 ZNF286AQ9HBT8 521 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 ABRACLQ9P1F3 81 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 GNG12Q9UBI6 72 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 LSM2Q9Y333 95 aaKnown RBP4.54□□□□□ -1.68
SUDS3-202ENST00000541280 TANC2Q9HCD6 1990 aa4.54□□□□□ -1.68
SUDS3-202ENST00000541280 CUBNO60494 3623 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 TRBV6-6A0A0A6YYG2 114 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 TRAV1-2A0A0B4J238 106 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 MEX3AA1L020 520 aaKnown RBP4.53□□□□□ -1.68
SUDS3-202ENST00000541280 TMEM14DPA8MWL7 114 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 SLC17A2O00624 439 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 ITGB1BP1O14713 200 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 FGF16O43320 207 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 YPEL1O60688 119 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 ATP6V1G2O95670 118 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 CD1BP29016 333 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 SLC6A1P30531 599 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 VDAC2P45880 294 aaPredicted RBP4.53□□□□□ -1.68
SUDS3-202ENST00000541280 ZNF137PP52743 207 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 GABARAPL2P60520 117 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 BLCAPP62952 87 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 RPS27AP62979 156 aaKnown RBP4.53□□□□□ -1.68
SUDS3-202ENST00000541280 EBI3Q14213 229 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 ARL6IP1Q15041 203 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 LDLRAD2Q5SZI1 272 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 LIPKQ5VXJ0 399 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 MOB1BQ7L9L4 216 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 FAM89BQ8N5H3 189 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 KLHDC1Q8N7A1 406 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 OR4X2Q8NGF9 303 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 PLPPR1Q8TBJ4 325 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 CCDC107Q8WV48 283 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 CNBD2Q96M20 576 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 YPEL2Q96QA6 119 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 CHCHD6Q9BRQ6 235 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 TMEM59Q9BXS4 323 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 BANF2Q9H503 90 aa4.53□□□□□ -1.68
SUDS3-202ENST00000541280 PLGRKTQ9HBL7 147 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms