RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 A0A1W2PPE3 182 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 SIX6O95475 246 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 IFNA21P01568 189 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 SERPINE2P07093 398 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 SLC25A16P16260 332 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 DUTP33316 252 aaKnown RBP14.5□□□□□ -0.09
CLIP1-215ENST00000541108 PAX2Q02962 417 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 DEFB113Q30KQ7 82 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 DCAF12L2Q5VW00 463 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 ZNF695Q8IW36 515 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 LYG1Q8N1E2 194 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 ABHD12Q8N2K0 398 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 RBPMSQ93062 196 aaKnown RBP14.5□□□□□ -0.09
CLIP1-215ENST00000541108 S1PR3Q99500 378 aa14.5□□□□□ -0.09
CLIP1-215ENST00000541108 IGHV4-30-2A0A087WSY4 118 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 SAA2-SAA4A0A096LPE2 208 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 BOLA2-SMG1P6H3BVE0 249 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 ADAP1O75689 374 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 C1QBP02746 253 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 SAA2P0DJI9 122 aaPredicted RBP14.49□□□□□ -0.09
CLIP1-215ENST00000541108 CLEC12BQ2HXU8 276 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 ZFP69Q49AA0 526 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 LHFPL5Q8TAF8 219 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 CD300LFQ8TDQ1 290 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 MBD6Q96DN6 1003 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 ZNF251Q9BRH9 671 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 CHIAQ9BZP6 476 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 RANBP3Q9H6Z4 567 aaPredicted RBP14.49□□□□□ -0.09
CLIP1-215ENST00000541108 ONECUT1Q9UBC0 465 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 KPTNQ9Y664 436 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 C5orf51A6NDU8 294 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 HOXB5P09067 269 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 PRRX1P54821 245 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 ARF6P62330 175 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 RPL30P62888 115 aaKnown RBP14.49□□□□□ -0.09
CLIP1-215ENST00000541108 TMEM268Q5VZI3 342 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 FAM71F2Q6NXP2 309 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 BTNL3Q6UXE8 466 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 SELENOHQ8IZQ5 122 aaKnown RBP14.49□□□□□ -0.09
CLIP1-215ENST00000541108 Q8N7P7 452 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 OR2T35Q8NGX2 323 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 TMEM186Q96B77 213 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 ADTRPQ96IZ2 230 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 PDCD10Q9BUL8 212 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 NMES1Q9C002 83 aa14.49□□□□□ -0.09
CLIP1-215ENST00000541108 UNKLQ9H9P5 680 aaKnown RBP14.49□□□□□ -0.09
CLIP1-215ENST00000541108 IGHV2-26A0A0B4J1V2 119 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 IGHV4-61A0A0C4DH41 118 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 C13orf42A0A1B0GVH6 325 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 FAM25EA8MYX2 175 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 CCSO14618 274 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 ZNF16P17020 682 aaPredicted RBP14.48□□□□□ -0.09
CLIP1-215ENST00000541108 VDAC1P21796 283 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 PRTN3P24158 256 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 ZNF137PP52743 207 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 ZNF585BQ52M93 769 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 RPL39P5Q59GN2 51 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 LYZL2Q7Z4W2 148 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 SLC35G3Q8N808 338 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 BEND2Q8NDZ0 799 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 TCTEX1D2Q8WW35 142 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 CLEC7AQ9BXN2 247 aa14.48□□□□□ -0.09
CLIP1-215ENST00000541108 CENPEQ02224 2701 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 IGHV2-70DA0A0C4DH43 119 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 LINC00473A8K010 186 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 M0R1X1 148 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 TOR1AO14656 332 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 IGLV1-47P01700 117 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 LCN2P80188 198 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 GGNBP1Q5YKI7 109 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 ZNF833PQ6ZTB9 187 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 OR13D1Q8NGV5 346 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 OR10X1Q8NGY0 326 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 SEC22AQ96IW7 307 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 C2orf50Q96LR7 162 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 HYLS1Q96M11 299 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 PRELID3BQ9Y3B1 194 aa14.47□□□□□ -0.09
CLIP1-215ENST00000541108 RBFOX2O43251 390 aaKnown RBP eCLIP14.46□□□□□ -0.09
CLIP1-215ENST00000541108 THBS3P49746 956 aa14.46□□□□□ -0.09
CLIP1-215ENST00000541108 FGL1Q08830 312 aa14.46□□□□□ -0.09
CLIP1-215ENST00000541108 C1orf229Q6ZS94 237 aaPredicted RBP14.46□□□□□ -0.09
CLIP1-215ENST00000541108 NOXA1Q86UR1 476 aa14.46□□□□□ -0.09
CLIP1-215ENST00000541108 SPAG16Q8N0X2 631 aa14.46□□□□□ -0.09
CLIP1-215ENST00000541108 OR10C1Q96KK4 312 aa14.46□□□□□ -0.09
CLIP1-215ENST00000541108 HEXA-AS1Q9H8Q6 139 aa14.46□□□□□ -0.09
CLIP1-215ENST00000541108 ARHGAP32A7KAX9 2087 aa14.46□□□□□ -0.09
CLIP1-215ENST00000541108 MPTX1A8MV57 137 aa14.46□□□□□ -0.1
CLIP1-215ENST00000541108 IL3RAP26951 378 aa14.46□□□□□ -0.1
CLIP1-215ENST00000541108 KIR2DS2P43631 304 aa14.46□□□□□ -0.1
CLIP1-215ENST00000541108 EIF2B2P49770 351 aaKnown RBP14.46□□□□□ -0.1
CLIP1-215ENST00000541108 GZMKP49863 264 aa14.46□□□□□ -0.1
CLIP1-215ENST00000541108 BRWD1-AS2P59051 145 aa14.46□□□□□ -0.1
CLIP1-215ENST00000541108 NCR3LG1Q68D85 454 aa14.46□□□□□ -0.1
CLIP1-215ENST00000541108 OR11H6Q8NGC7 330 aa14.46□□□□□ -0.1
CLIP1-215ENST00000541108 DDB2Q92466 427 aa14.46□□□□□ -0.1
CLIP1-215ENST00000541108 ST6GALNAC6Q969X2 333 aa14.46□□□□□ -0.1
CLIP1-215ENST00000541108 ANKRD17O75179 2603 aaKnown RBP14.45□□□□□ -0.1
CLIP1-215ENST00000541108 FAM157AC9JC47 383 aa14.45□□□□□ -0.1
CLIP1-215ENST00000541108 ATG12O94817 140 aa14.45□□□□□ -0.1
CLIP1-215ENST00000541108 USF1P22415 310 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms