RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 H1FXQ92522 213 aaKnown RBP10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 UBTD1Q9HAC8 227 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 KAAG1Q9UBP8 84 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 LINC00312Q9Y6C7 94 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 FLNCQ14315 2725 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 KIAA1324LA8MWY0 1029 aaPredicted RBP10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 NDUFB3O43676 98 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 PITX3O75364 302 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 S1PR2O95136 353 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 TMEM50AO95807 157 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 CLDN1O95832 211 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 PLA2G2AP14555 144 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 S100GP29377 79 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 GPR12P47775 334 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 DLX1P56177 255 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 DLX6P56179 175 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 SPAG16Q8N0X2 631 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 INO80EQ8NBZ0 244 aaPredicted RBP10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 ZBTB34Q8NCN2 500 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 AQP10Q96PS8 301 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 ZNF251Q9BRH9 671 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 PLEKHF2Q9H8W4 249 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 LIN7CQ9NUP9 197 aaKnown RBP10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 RPUSD1Q9UJJ7 312 aaKnown RBP10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 POMT1Q9Y6A1 747 aa10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 USP9XQ93008 2570 aaPredicted RBP10.08□□□□□ -0.8
AP003559.1-201ENST00000540906 DUXBA0A1W2PPF3 345 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 hADV38S2A0JD32 116 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 P0C879 139 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 DUTP33316 252 aaKnown RBP10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 PRB3Q04118 309 aaPredicted RBP10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 MSMO1Q15800 293 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 ST8SIA2Q92186 375 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 ABHD14AQ9BUJ0 271 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 CACNG5Q9UF02 275 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 MYO18BQ8IUG5 2567 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 SAA2-SAA4A0A096LPE2 208 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 A6NNC1 897 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 M0R1X1 148 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 SAA2P0DJI9 122 aaPredicted RBP10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 G6PCP35575 357 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 MEF2CQ06413 473 aaPredicted RBP10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 LRRC10Q5BKY1 277 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 SLC51BQ86UW2 128 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 OR8H3Q8N146 312 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 C11orf42Q8N5U0 333 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 ZNF471Q9BX82 626 aaPredicted RBP10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 RAB1BQ9H0U4 201 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 UBQLN2Q9UHD9 624 aa10.07□□□□□ -0.8
AP003559.1-201ENST00000540906 KANTRA0A1W2PQU2 76 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 ST8SIA3O43173 380 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 B3GALNT1O75752 331 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 RPL12P30050 165 aaKnown RBP10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 ID3Q02535 119 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 SRSF1Q07955 248 aaKnown RBP eCLIP10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 FAM74A1Q5RGS3 127 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 ZNF714Q96N38 554 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 ARPC5LQ9BPX5 153 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 SMIM3Q9BZL3 60 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 WFDC1Q9HC57 220 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 TAS2R3Q9NYW6 316 aa10.06□□□□□ -0.8
AP003559.1-201ENST00000540906 FAM24AA6NFZ4 105 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 RNF212BA8MTL3 300 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 F5H0A9 414 aaPredicted RBP10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 SSSCA1O60232 199 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 KRASP01116 189 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 IFNA7P01567 189 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 PET100P0DJ07 73 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 DAOP14920 347 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 C4BPBP20851 252 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 NKX2-1P43699 371 aaPredicted RBP10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 AKR1C2P52895 323 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 PAX9P55771 341 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 SMCO1Q147U7 214 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 TMEM155Q4W5P6 130 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 ZNF66Q6ZN08 573 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 LSM10Q969L4 123 aaKnown RBP10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 MALRD1Q5VYJ5 2156 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 IGSF23A1L1A6 192 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 E5RGE8 158 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 J3QKU1 62 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 ITGB1BP1O14713 200 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 MIDNQ504T8 468 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 RPL7L1Q6DKI1 246 aaKnown RBP10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 THOC7Q6I9Y2 204 aaKnown RBP10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 HEPN1Q6WQI6 88 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 SLC25A48Q6ZT89 311 aaKnown RBP10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 LYG1Q8N1E2 194 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 DDB2Q92466 427 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 HSD17B10Q99714 261 aaKnown RBP10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 SPIN2AQ99865 258 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 SPIN2BQ9BPZ2 258 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 NARFLQ9H6Q4 476 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 FBXL17Q9UF56 701 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 NSG2Q9Y328 171 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 ARHGAP32A7KAX9 2087 aa10.05□□□□□ -0.8
AP003559.1-201ENST00000540906 DOPEY1Q5JWR5 2465 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 DOCK11Q5JSL3 2073 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 A0A1B0GU03 582 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms