RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 RLN2P04090 185 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 ATP5J2P56134 94 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 TCF23Q7RTU1 214 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 OR8H3Q8N146 312 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 RFESDQ8TAC1 157 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 MBD6Q96DN6 1003 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 POMT1Q9Y6A1 747 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 ABCA2Q9BZC7 2435 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 CSMD1Q96PZ7 3565 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 IGHV3-43A0A0B4J1X8 118 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 E5RGE8 158 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 ST8SIA3O43173 380 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 ADAM20O43506 726 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 YPEL1O60688 119 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 SPDEFO95238 335 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 IGHV3-43DP0DP04 118 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 SLC25A6P12236 298 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 TMEM33P57088 247 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 LOXL3P58215 753 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 AVPI1Q5T686 147 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 THOC7Q6I9Y2 204 aaKnown RBP10.28□□□□□ -0.76
SMAD3-204ENST00000540846 ALKAL2Q6UX46 152 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 LYPD2Q6UXB3 125 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 FOXRED2Q8IWF2 684 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 STOML3Q8TAV4 291 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 PERPQ96FX8 193 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 YPEL2Q96QA6 119 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 AGMATQ9BSE5 352 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 LINC00574Q9H8X3 128 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 PLEKHA2Q9HB19 425 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 BARX1Q9HBU1 254 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-204ENST00000540846 BEX4Q9NWD9 120 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-204ENST00000540846 CTSZQ9UBR2 303 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 RCL1Q9Y2P8 373 aaKnown RBP10.28□□□□□ -0.76
SMAD3-204ENST00000540846 NSG2Q9Y328 171 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 LSM5Q9Y4Y9 91 aaKnown RBP10.28□□□□□ -0.76
SMAD3-204ENST00000540846 VPS13CQ709C8 3753 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 DOCK11Q5JSL3 2073 aa10.28□□□□□ -0.76
SMAD3-204ENST00000540846 TRGV10A0A0A0MS01 117 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 KBTBD11-OT1A0A1B0GTJ5 212 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 MEX3AA1L020 520 aaKnown RBP10.27□□□□□ -0.76
SMAD3-204ENST00000540846 LINC00862A6NCI5 91 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 VWC2LB2RUY7 222 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 ITGB1BP1O14713 200 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 IGKV1-39P01597 117 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 IGKV1D-39P04432 117 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 HKR1P10072 659 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 S100A1P23297 94 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 C17orf58Q2M2W7 97 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 DEFB113Q30KQ7 82 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 TMEM30BQ3MIR4 351 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 MORN2Q502X0 79 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 ZNF585BQ52M93 769 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 TCTEX1D1Q8N7M0 179 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 CORO2AQ92828 525 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 LSM10Q969L4 123 aaKnown RBP10.27□□□□□ -0.76
SMAD3-204ENST00000540846 PHYHIPLQ96FC7 376 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 ZNF471Q9BX82 626 aaPredicted RBP10.27□□□□□ -0.76
SMAD3-204ENST00000540846 C11orf1Q9H5F2 150 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 FAM212BQ9NTI7 297 aaPredicted RBP10.27□□□□□ -0.76
SMAD3-204ENST00000540846 GNG12Q9UBI6 72 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 KAAG1Q9UBP8 84 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 CLN8Q9UBY8 286 aa10.27□□□□□ -0.76
SMAD3-204ENST00000540846 PRRC2AP48634 2157 aaKnown RBP10.27□□□□□ -0.77
SMAD3-204ENST00000540846 ZNF729A6NN14 1252 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-204ENST00000540846 F5H0A9 414 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-204ENST00000540846 PPIHO43447 177 aaKnown RBP10.26□□□□□ -0.77
SMAD3-204ENST00000540846 RPL12P30050 165 aaKnown RBP10.26□□□□□ -0.77
SMAD3-204ENST00000540846 RAB14P61106 215 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 CATR1Q13166 79 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 TMEM155Q4W5P6 130 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 KRTAP1-3Q8IUG1 177 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 LRRC75A-AS1Q8N1F1 130 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 FGFRL1Q8N441 504 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 C10orf105Q8TEF2 133 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 CYTL1Q9NRR1 136 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 RNF150Q9ULK6 438 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 PSG11Q9UQ72 335 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 AUP1Q9Y679 476 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 A0A0G2JRQ6 117 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 A0A1B0GU03 582 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 TMPRSS2O15393 492 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 ST8SIA5O15466 376 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 PITX3O75364 302 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 IGKV1-5P01602 117 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 ZNF16P17020 682 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-204ENST00000540846 NKX2-1P43699 371 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-204ENST00000540846 PDLIM4P50479 330 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 MEF2CQ06413 473 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-204ENST00000540846 LTC4SQ16873 150 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 ZNF66Q6ZN08 573 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 ZNF841Q6ZN19 808 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 DMBX1Q8NFW5 382 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 RAB1CQ92928 201 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 HSD17B10Q99714 261 aaKnown RBP10.26□□□□□ -0.77
SMAD3-204ENST00000540846 BPESC1Q9GZL8 116 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 SDHAF2Q9NX18 166 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 GFOD1Q9NXC2 390 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 SLC25A10Q9UBX3 287 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms