RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ALX4Q9H161 411 aaPredicted RBP5.62□□□□□ -1.51
YBX3-209ENST00000540747 MIXL1Q9H2W2 232 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 OR51J1Q9H342 316 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 RCC2Q9P258 522 aaKnown RBP5.62□□□□□ -1.51
YBX3-209ENST00000540747 COMMD3Q9UBI1 195 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 ZNF221Q9UK13 617 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 FBXO7Q9Y3I1 522 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 WSB1Q9Y6I7 421 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 IGHV4OR15-8A0A075B7B6 117 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 A0A087WW49 117 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 IGHV3-43A0A0B4J1X8 118 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 TRAV41A0A0B4J266 112 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 E9PI62 339 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 LINC01619G3V211 115 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 SDCBPO00560 298 aaPredicted RBP5.61□□□□□ -1.51
YBX3-209ENST00000540747 GEMIN2O14893 280 aaKnown RBP5.61□□□□□ -1.51
YBX3-209ENST00000540747 NDUFA3O95167 84 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 IGLV1-51P01701 117 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 LGALS1P09382 135 aaKnown RBP5.61□□□□□ -1.51
YBX3-209ENST00000540747 IGHV3-43DP0DP04 118 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 SLC2A2P11168 524 aaPredicted RBP5.61□□□□□ -1.51
YBX3-209ENST00000540747 IL3RAP26951 378 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 CNTFRP26992 372 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 BLVRBP30043 206 aaPredicted RBP5.61□□□□□ -1.51
YBX3-209ENST00000540747 TAS2R43P59537 309 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 BAK1Q16611 211 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 NDUFA5Q16718 116 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 C5orf64Q2M2E5 130 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 TMEM30BQ3MIR4 351 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 CD200R1LQ6Q8B3 271 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 NRARPQ7Z6K4 114 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 LINC00596Q86U02 117 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 ODF3L1Q8IXM7 274 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 SYS1Q8N2H4 156 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 NPBQ8NG41 125 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 ENKURQ8TC29 256 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 ARPC1AQ92747 370 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 C4orf36Q96KX1 117 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 THAP7Q9BT49 309 aaPredicted RBP5.61□□□□□ -1.51
YBX3-209ENST00000540747 ALG8Q9BVK2 526 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 TBC1D24Q9ULP9 559 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 ST3GAL6Q9Y274 331 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 V9GYH0 126 aa5.61□□□□□ -1.51
YBX3-209ENST00000540747 KIAA1109Q2LD37 5005 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 SMIM30A4D0T7 59 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 TMEM212A6NML5 194 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 CENPXA8MT69 81 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 J3QLW9 94 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 HSPA12AO43301 675 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 HPGDSO60760 199 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 SC5DO75845 299 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 OR7C1O76099 320 aaPredicted RBP5.6□□□□□ -1.51
YBX3-209ENST00000540747 OR8U9P0C7N5 309 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 TRAPPC2P0DI81 140 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 TRAPPC2BP0DI82 140 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 EGR2P11161 476 aaPredicted RBP5.6□□□□□ -1.51
YBX3-209ENST00000540747 ZNF19P17023 458 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 RAB3AP20336 220 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 MYL9P24844 172 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 TALDO1P37837 337 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 GBX2P52951 348 aaPredicted RBP5.6□□□□□ -1.51
YBX3-209ENST00000540747 ACTBP60709 375 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 IL18Q14116 193 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 RSU1Q15404 277 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 MMDQ15546 238 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 MPV17LQ2QL34 196 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 IDNKQ5T6J7 187 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 CNIH2Q6PI25 160 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 TMEM65Q6PI78 240 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 PLET1Q6UQ28 207 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 TPRA1Q86W33 373 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 MS4A15Q8N5U1 240 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 ZNF485Q8NCK3 441 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 OR1L1Q8NH94 360 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 CPNE2Q96FN4 548 aaPredicted RBP5.6□□□□□ -1.51
YBX3-209ENST00000540747 ZNF486Q96H40 463 aaPredicted RBP5.6□□□□□ -1.51
YBX3-209ENST00000540747 CYYR1Q96J86 154 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 NEDD4LQ96PU5 975 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 NABP2Q9BQ15 211 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 PDCD1LG2Q9BQ51 273 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 MRPL20Q9BYC9 149 aaKnown RBP5.6□□□□□ -1.51
YBX3-209ENST00000540747 ISG20L2Q9H9L3 353 aaKnown RBP5.6□□□□□ -1.51
YBX3-209ENST00000540747 PARP11Q9NR21 331 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 TAS2R4Q9NYW5 299 aa5.6□□□□□ -1.51
YBX3-209ENST00000540747 MRPS28Q9Y2Q9 187 aaKnown RBP5.6□□□□□ -1.51
YBX3-209ENST00000540747 FAM240BA0A1B0GVZ2 78 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 A0A1W2PP11 408 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 AIPO00170 330 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 NBR2O15453 112 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 HTR3BO95264 441 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 LALBAP00709 142 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 HBZP02008 142 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 HLA-DMAP28067 261 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 RFX2P48378 723 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 MRPS15P82914 257 aaKnown RBP5.59□□□□□ -1.51
YBX3-209ENST00000540747 GNMTQ14749 295 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 ZNF79Q15937 498 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 SRSF7Q16629 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
YBX3-209ENST00000540747 HAGHQ16775 308 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 ZFP69Q49AA0 526 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms