RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ZNF716A6NP11 495 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 H0YIZ8 118 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 CNN1P51911 297 aaKnown RBP8.56□□□□□ -1.04
TRAF1-202ENST00000540010 PAX5Q02548 391 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 DHRS7BQ6IAN0 325 aaPredicted RBP8.56□□□□□ -1.04
TRAF1-202ENST00000540010 MRPL54Q6P161 138 aaKnown RBP8.56□□□□□ -1.04
TRAF1-202ENST00000540010 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
TRAF1-202ENST00000540010 OR4P4Q8NGL7 312 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 SGMS2Q8NHU3 365 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 HSD17B10Q99714 261 aaKnown RBP8.56□□□□□ -1.04
TRAF1-202ENST00000540010 FAM117AQ9C073 453 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 SRD5A3Q9H8P0 318 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 OTOGLQ3ZCN5 2332 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 B4DEV8 164 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 SYNGR1O43759 233 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 PRF1P14222 555 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 ZNF25P17030 456 aaPredicted RBP8.56□□□□□ -1.04
TRAF1-202ENST00000540010 FCER1GP30273 86 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 GFRA1P56159 465 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 R3HDM4Q96D70 268 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 OR2J1Q9GZK6 312 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 ZNF319Q9P2F9 582 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 ZNF407Q9C0G0 2248 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 A0A1B0GTI1 187 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 M0R143 59 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 DANCRP0C864 163 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 CT45A10P0DMU9 189 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 RNPS1Q15287 305 aaKnown RBP8.55□□□□□ -1.04
TRAF1-202ENST00000540010 ASPHD2Q6ICH7 369 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 MYO7BQ6PIF6 2116 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 C16orf82Q7Z2V1 217 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 KLHDC1Q8N7A1 406 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 BLNKQ8WV28 456 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 PCGF1Q9BSM1 259 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 OR51M1Q9H341 326 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 FOXD3Q9UJU5 478 aaPredicted RBP8.55□□□□□ -1.04
TRAF1-202ENST00000540010 ATP23Q9Y6H3 246 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 CACNA1BQ00975 2339 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 HEATR1Q9H583 2144 aaKnown RBP8.55□□□□□ -1.04
TRAF1-202ENST00000540010 A0A1B0GU03 582 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 A0A1W2PPE3 182 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 C21orf62-AS1Q17RA5 79 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 PIP4P1Q86T03 277 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 H1FOOQ8IZA3 346 aaPredicted RBP8.55□□□□□ -1.04
TRAF1-202ENST00000540010 ZADH2Q8N4Q0 377 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 OR5A2Q8NGI9 324 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 HES4Q9HCC6 221 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 ST8SIA5O15466 376 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 OPRK1P41145 380 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 RHOBP62745 196 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 ABLIM2Q6H8Q1 611 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 SLC24A4Q8NFF2 622 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 VN1R17PQ8TDU5 208 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 NABP1Q96AH0 204 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 ABHD14BQ96IU4 210 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 TP53RKQ96S44 253 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 ABHD14AQ9BUJ0 271 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 RNF126Q9BV68 326 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 EGLN1Q9GZT9 426 aa8.55□□□□□ -1.04
TRAF1-202ENST00000540010 PNRC2Q9NPJ4 139 aaKnown RBP8.55□□□□□ -1.04
TRAF1-202ENST00000540010 PITX3O75364 302 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 EGR1P18146 543 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 IER3P46695 156 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 LHX2P50458 406 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 GAMTQ14353 236 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 PSG5Q15238 335 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 ATP6V1FQ16864 119 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 Q96M66 194 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 OR4C12Q96R67 309 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 GINS3Q9BRX5 216 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 CFAP54Q96N23 3096 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 PRR33A8MZF0 331 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 AGFG2O95081 481 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 CHRNB4P30926 498 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 MEF2BQ02080 365 aaPredicted RBP8.54□□□□□ -1.04
TRAF1-202ENST00000540010 SRSF6Q13247 344 aaKnown RBP8.54□□□□□ -1.04
TRAF1-202ENST00000540010 TMEM183BQ1AE95 376 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 MOB3AQ96BX8 217 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 TUBD1Q9UJT1 453 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 LINC00587B1AMM8 73 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 J3QT63 122 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 K7EQM0 130 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 HAND1O96004 215 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 FAM157CP0CG43 387 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 PKIAP61925 76 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 SPNS3Q6ZMD2 512 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 NGBQ9NPG2 151 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 IL36GQ9NZH8 169 aa8.54□□□□□ -1.04
TRAF1-202ENST00000540010 ZFHX2Q9C0A1 2572 aaPredicted RBP8.54□□□□□ -1.04
TRAF1-202ENST00000540010 SNURFLB1AK76 121 aa8.53□□□□□ -1.04
TRAF1-202ENST00000540010 NDUFB4O95168 129 aa8.53□□□□□ -1.04
TRAF1-202ENST00000540010 HRASP01112 189 aa8.53□□□□□ -1.04
TRAF1-202ENST00000540010 CSN3P07498 182 aa8.53□□□□□ -1.04
TRAF1-202ENST00000540010 TRGC1P0CF51 173 aa8.53□□□□□ -1.04
TRAF1-202ENST00000540010 ORM2P19652 201 aa8.53□□□□□ -1.04
TRAF1-202ENST00000540010 CLDN18P56856 261 aa8.53□□□□□ -1.04
TRAF1-202ENST00000540010 SLC25A40Q8TBP6 338 aa8.53□□□□□ -1.04
TRAF1-202ENST00000540010 GPR146Q96CH1 333 aa8.53□□□□□ -1.04
TRAF1-202ENST00000540010 NOL4LQ96MY1 436 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms