RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 C10orf35Q96D05 121 aa4.89□□□□□ -1.63
CPSF7-219ENST00000539952 RAB3CQ96E17 227 aa4.89□□□□□ -1.63
CPSF7-219ENST00000539952 CPNE2Q96FN4 548 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-219ENST00000539952 KIRREL1Q96J84 757 aa4.89□□□□□ -1.63
CPSF7-219ENST00000539952 S100A13Q99584 98 aa4.89□□□□□ -1.63
CPSF7-219ENST00000539952 SULT4A1Q9BR01 284 aa4.89□□□□□ -1.63
CPSF7-219ENST00000539952 OR51M1Q9H341 326 aa4.89□□□□□ -1.63
CPSF7-219ENST00000539952 TAF9BQ9HBM6 251 aa4.89□□□□□ -1.63
CPSF7-219ENST00000539952 AURKAIP1Q9NWT8 199 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-219ENST00000539952 MRPL22Q9NWU5 206 aaKnown RBP4.89□□□□□ -1.63
CPSF7-219ENST00000539952 METTL1Q9UBP6 276 aaKnown RBP4.89□□□□□ -1.63
CPSF7-219ENST00000539952 VPREB3Q9UKI3 123 aa4.89□□□□□ -1.63
CPSF7-219ENST00000539952 COA3Q9Y2R0 106 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-219ENST00000539952 U3KQE9 123 aa4.89□□□□□ -1.63
CPSF7-219ENST00000539952 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 TRAV38-1A0A0B4J264 116 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 SERPINE3A8MV23 424 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 C22orf46C9J442 243 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 E5RGE8 158 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 H7C1C5 153 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 CCSO14618 274 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 TGOLN2O43493 480 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 FCGR3AP08637 254 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 SFTA3P0C7M3 94 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 SPP1P10451 314 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 SLC2A1P11166 492 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 FAHP16930 419 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 RCC1P18754 421 aaPredicted RBP4.88□□□□□ -1.63
CPSF7-219ENST00000539952 MSR1P21757 451 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 RPL12P30050 165 aaKnown RBP4.88□□□□□ -1.63
CPSF7-219ENST00000539952 ADMP35318 185 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 LCN6P62502 163 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 MFGE8Q08431 387 aaPredicted RBP4.88□□□□□ -1.63
CPSF7-219ENST00000539952 IL15RAQ13261 267 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 ARFRP1Q13795 201 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 ATXN7L3Q14CW9 347 aaPredicted RBP4.88□□□□□ -1.63
CPSF7-219ENST00000539952 RHEBQ15382 184 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 DNLZQ5SXM8 178 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 FBXW12Q6X9E4 464 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 FOXL2NBQ6ZUU3 175 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 DCXRQ7Z4W1 244 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 MOGAT3Q86VF5 341 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 LHFPL1Q86WI0 220 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 SGPP2Q8IWX5 399 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 FAM89BQ8N5H3 189 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 WFDC9Q8NEX5 89 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 SLC26A10Q8NG04 563 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 OR4F17Q8NGA8 305 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 OR4D6Q8NGJ1 314 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 OR4A4PQ8NGN8 299 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 OR2T6Q8NHC8 308 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 Q8TCH9 128 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 RXFP4Q8TDU9 374 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 TMED6Q8WW62 240 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 TECTBQ96PL2 329 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 OR4F4Q96R69 305 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 AMELYQ99218 206 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 SELENOIQ9C0D9 397 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 SLC5A7Q9GZV3 580 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 PBOV1Q9GZY1 135 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 FAM234AQ9H0X4 552 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 SIRPDQ9H106 197 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 HRH4Q9H3N8 390 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 TMPRSS5Q9H3S3 457 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 RGCCQ9H4X1 137 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 TPSG1Q9NRR2 321 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 RNF7Q9UBF6 113 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 NSG2Q9Y328 171 aa4.88□□□□□ -1.63
CPSF7-219ENST00000539952 TET2Q6N021 2002 aaPredicted RBP4.88□□□□□ -1.63
CPSF7-219ENST00000539952 IGKV1D-43A0A0B4J1Z2 117 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 MEX3AA1L020 520 aaKnown RBP4.87□□□□□ -1.63
CPSF7-219ENST00000539952 IQCF6A8MYZ5 107 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 ZNF878C9JN71 531 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 K7EPK0 472 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 AP4M1O00189 453 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 SGCEO43556 437 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 MED6O75586 246 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 MPIG6BO95866 241 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 PMP2P02689 132 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 CSN2P05814 226 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 FABP1P07148 127 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 CTSDP07339 412 aaPredicted RBP4.87□□□□□ -1.63
CPSF7-219ENST00000539952 HIST1H1DP16402 221 aaKnown RBP4.87□□□□□ -1.63
CPSF7-219ENST00000539952 CTLA4P16410 223 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 ADCYAP1P18509 176 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 AMY2BP19961 511 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 CCL1P22362 96 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 PTGFRP43088 359 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 HTR5AP47898 357 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 NPBWR1P48145 328 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 RAB2AP61019 212 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 SNRPEP62304 92 aaKnown RBP4.87□□□□□ -1.63
CPSF7-219ENST00000539952 POLR2GP62487 172 aaKnown RBP eCLIP4.87□□□□□ -1.63
CPSF7-219ENST00000539952 GRB2P62993 217 aaKnown RBP4.87□□□□□ -1.63
CPSF7-219ENST00000539952 IL13RA2Q14627 380 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 KCNMB1Q16558 191 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 MOGAT2Q3SYC2 334 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 FAM201AQ5SY85 155 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 OR2T2Q6IF00 324 aa4.87□□□□□ -1.63
CPSF7-219ENST00000539952 TMEM88Q6PEY1 159 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms