RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 BRWD1-AS2P59051 145 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 ZNF273Q14593 569 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 PRAMEF5Q5TYX0 476 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 ZNF66Q6ZN08 573 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 SPAG16Q8N0X2 631 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 LSM10Q969L4 123 aaKnown RBP18.53■□□□□ 0.56
HOMER3-204ENST00000539827 C11orf1Q9H5F2 150 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 MED9Q9NWA0 146 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 CTSZQ9UBR2 303 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 PIGBOS1A0A0B4J2F0 54 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 A0A1B0GU03 582 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 NDUFB3O43676 98 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 GPR137BO60478 399 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 PROP1O75360 226 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 P2RY1P47900 373 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 ID3Q02535 119 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 H1FXQ92522 213 aaKnown RBP18.53■□□□□ 0.56
HOMER3-204ENST00000539827 IFI27L2Q9H2X8 130 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 CACNG5Q9UF02 275 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 FBXL17Q9UF56 701 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 PITX3O75364 302 aa18.52■□□□□ 0.56
HOMER3-204ENST00000539827 NMBP08949 121 aa18.52■□□□□ 0.56
HOMER3-204ENST00000539827 RPL39P5Q59GN2 51 aa18.52■□□□□ 0.56
HOMER3-204ENST00000539827 STOML3Q8TAV4 291 aa18.52■□□□□ 0.56
HOMER3-204ENST00000539827 S1PR2O95136 353 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 TPT1P13693 172 aaKnown RBP18.51■□□□□ 0.55
HOMER3-204ENST00000539827 PPOXP50336 477 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 TMEM33P57088 247 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 ERVFRD-1P60508 538 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 RPL31P62899 125 aaKnown RBP18.51■□□□□ 0.55
HOMER3-204ENST00000539827 CT45A1Q5HYN5 189 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 RPL7L1Q6DKI1 246 aaKnown RBP18.51■□□□□ 0.55
HOMER3-204ENST00000539827 CT45A3Q8NHU0 189 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 CXorf58Q96LI9 332 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 HSD17B10Q99714 261 aaKnown RBP18.51■□□□□ 0.55
HOMER3-204ENST00000539827 LINC00312Q9Y6C7 94 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 FAM24AA6NFZ4 105 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 M0R1X1 148 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 DVL1O14640 695 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 SLC25A6P12236 298 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 LRRC10Q5BKY1 277 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 NCR3LG1Q68D85 454 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 ABHD14AQ9BUJ0 271 aa18.51■□□□□ 0.55
HOMER3-204ENST00000539827 SMG1Q96Q15 3661 aaKnown RBP18.5■□□□□ 0.55
HOMER3-204ENST00000539827 SHOXO15266 292 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 PVALBP20472 110 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-204ENST00000539827 DUTP33316 252 aaKnown RBP18.5■□□□□ 0.55
HOMER3-204ENST00000539827 G6PCP35575 357 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 GNG10P50151 68 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 VAMP2P63027 116 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 BAP18Q8IXM2 172 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 CBLN4Q9NTU7 201 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 RALYQ9UKM9 306 aaKnown RBP18.5■□□□□ 0.55
HOMER3-204ENST00000539827 YLPM1P49750 1951 aaKnown RBP18.5■□□□□ 0.55
HOMER3-204ENST00000539827 C19orf84I3L1E1 186 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 WRBO00258 174 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 TAAR5O14804 337 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 CHST1O43916 411 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 CCL3L1P16619 93 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 MEF2CQ06413 473 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-204ENST00000539827 AANATQ16613 207 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 GPR157Q5UAW9 335 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 TMEM200BQ69YZ2 307 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 C1orf229Q6ZS94 237 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-204ENST00000539827 PHYHIPLQ96FC7 376 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 LINC00574Q9H8X3 128 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 TAS2R3Q9NYW6 316 aa18.5■□□□□ 0.55
HOMER3-204ENST00000539827 KALRNO60229 2985 aa18.49■□□□□ 0.55
HOMER3-204ENST00000539827 I3L521 148 aa18.49■□□□□ 0.55
HOMER3-204ENST00000539827 KRASP01116 189 aa18.49■□□□□ 0.55
HOMER3-204ENST00000539827 SOD3P08294 240 aa18.49■□□□□ 0.55
HOMER3-204ENST00000539827 AGAP20933 346 aa18.49■□□□□ 0.55
HOMER3-204ENST00000539827 NHLH2Q02577 135 aa18.49■□□□□ 0.55
HOMER3-204ENST00000539827 KIAA1324LA8MWY0 1029 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-204ENST00000539827 ITGB1BP1O14713 200 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 RAB7AP51149 207 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 CAV2P51636 162 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 OR2C3Q8N628 320 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 ZNF439Q8NDP4 499 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 FAM216AQ8WUB2 273 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 KAAG1Q9UBP8 84 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 RPUSD1Q9UJJ7 312 aaKnown RBP18.48■□□□□ 0.55
HOMER3-204ENST00000539827 MMP24Q9Y5R2 645 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 SESN1Q9Y6P5 492 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 ABCA4P78363 2273 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 IGSF23A1L1A6 192 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 LY6HO94772 140 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 TMEM50AO95807 157 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 C11orf71Q6IPW1 123 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 TCTEX1D1Q8N7M0 179 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 RAB1BQ9H0U4 201 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 SLC25A32Q9H2D1 315 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 WFDC1Q9HC57 220 aa18.48■□□□□ 0.55
HOMER3-204ENST00000539827 USF3Q68DE3 2245 aa18.47■□□□□ 0.55
HOMER3-204ENST00000539827 A0A1W2PPR1 153 aa18.47■□□□□ 0.55
HOMER3-204ENST00000539827 EWSR1Q01844 656 aaKnown RBP eCLIP18.47■□□□□ 0.55
HOMER3-204ENST00000539827 AVPI1Q5T686 147 aa18.47■□□□□ 0.55
HOMER3-204ENST00000539827 PDZD9Q8IXQ8 264 aa18.47■□□□□ 0.55
HOMER3-204ENST00000539827 ZNF714Q96N38 554 aa18.47■□□□□ 0.55
HOMER3-204ENST00000539827 GAL3ST2Q9H3Q3 398 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms