RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ANKRD30BLA7E2S9 258 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 FAM166BA8MTA8 275 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 TGOLN2O43493 480 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 PMS2P11Q13670 270 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 TGIF2LXQ8IUE1 241 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 ZDHHC16Q969W1 377 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 POM121L2Q96KW2 1035 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 DVL1O14640 695 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 PAGE4O60829 102 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 IGHEP01854 428 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 OR4A8P0C604 315 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 NUBP1P53384 320 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 SSX2Q16385 188 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 OR10G9Q8NGN4 311 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 OR10G7Q8NGN6 311 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 ZPBPQ9BS86 351 aa17.11■□□□□ 0.33
TMEM260-203ENST00000539559 CRYAAP02489 173 aa17.1■□□□□ 0.33
TMEM260-203ENST00000539559 TFF1P04155 84 aa17.1■□□□□ 0.33
TMEM260-203ENST00000539559 PSMB3P49720 205 aa17.1■□□□□ 0.33
TMEM260-203ENST00000539559 Q6P435 159 aa17.1■□□□□ 0.33
TMEM260-203ENST00000539559 ATG101Q9BSB4 218 aa17.1■□□□□ 0.33
TMEM260-203ENST00000539559 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.1■□□□□ 0.33
TMEM260-203ENST00000539559 OR2H2O95918 312 aa17.1■□□□□ 0.33
TMEM260-203ENST00000539559 CYB561P49447 251 aa17.1■□□□□ 0.33
TMEM260-203ENST00000539559 PINX1Q96BK5 328 aaKnown RBP17.1■□□□□ 0.33
TMEM260-203ENST00000539559 PYGO2Q9BRQ0 406 aa17.1■□□□□ 0.33
TMEM260-203ENST00000539559 GPR179Q6PRD1 2367 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 GYPAP02724 150 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 CD59P13987 128 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 GNG3P63215 75 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 FFAR4Q5NUL3 377 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 C6orf15Q6UXA7 325 aaPredicted RBP17.09■□□□□ 0.33
TMEM260-203ENST00000539559 C12orf49Q9H741 205 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 WASF3Q9UPY6 502 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 EREGO14944 169 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 ST8SIA5O15466 376 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 TNFRSF9Q07011 255 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 Q3ZCU0 254 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 TMPRSS7Q7RTY8 843 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 WDR86Q86TI4 376 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 ZNF573Q86YE8 665 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 OR51I2Q9H344 312 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 PCSK5Q92824 1860 aa17.09■□□□□ 0.33
TMEM260-203ENST00000539559 ZG16O60844 167 aa17.08■□□□□ 0.33
TMEM260-203ENST00000539559 NPPCP23582 126 aa17.08■□□□□ 0.33
TMEM260-203ENST00000539559 RPL30P62888 115 aaKnown RBP17.08■□□□□ 0.33
TMEM260-203ENST00000539559 DNLZQ5SXM8 178 aa17.08■□□□□ 0.33
TMEM260-203ENST00000539559 BTNL3Q6UXE8 466 aa17.08■□□□□ 0.33
TMEM260-203ENST00000539559 TMEM14EPQ6UXP3 125 aa17.08■□□□□ 0.33
TMEM260-203ENST00000539559 LIN7CQ9NUP9 197 aaKnown RBP17.08■□□□□ 0.33
TMEM260-203ENST00000539559 TRBV6-6A0A0A6YYG2 114 aa17.08■□□□□ 0.32
TMEM260-203ENST00000539559 PGPEP1LA6NFU8 196 aa17.08■□□□□ 0.32
TMEM260-203ENST00000539559 MKRN2OSH3BPM6 223 aa17.08■□□□□ 0.32
TMEM260-203ENST00000539559 CDX4O14627 284 aaPredicted RBP17.08■□□□□ 0.32
TMEM260-203ENST00000539559 PAX1P15863 534 aa17.08■□□□□ 0.32
TMEM260-203ENST00000539559 UBE2G2P60604 165 aa17.08■□□□□ 0.32
TMEM260-203ENST00000539559 OR1L1Q8NH94 360 aa17.08■□□□□ 0.32
TMEM260-203ENST00000539559 RAB24Q969Q5 203 aa17.08■□□□□ 0.32
TMEM260-203ENST00000539559 TMEM45BQ96B21 275 aa17.08■□□□□ 0.32
TMEM260-203ENST00000539559 MT-CO3P00414 261 aa17.07■□□□□ 0.32
TMEM260-203ENST00000539559 HRASP01112 189 aa17.07■□□□□ 0.32
TMEM260-203ENST00000539559 GCSAMLQ5JQS6 135 aa17.07■□□□□ 0.32
TMEM260-203ENST00000539559 NUFIP2Q7Z417 695 aaKnown RBP17.07■□□□□ 0.32
TMEM260-203ENST00000539559 LRP11Q86VZ4 500 aa17.07■□□□□ 0.32
TMEM260-203ENST00000539559 RNASEH2CQ8TDP1 164 aaKnown RBP17.07■□□□□ 0.32
TMEM260-203ENST00000539559 C5orf30Q96GV9 206 aa17.07■□□□□ 0.32
TMEM260-203ENST00000539559 THOC3Q96J01 351 aaKnown RBP17.07■□□□□ 0.32
TMEM260-203ENST00000539559 AGMATQ9BSE5 352 aa17.07■□□□□ 0.32
TMEM260-203ENST00000539559 SS18L1O75177 396 aaPredicted RBP17.07■□□□□ 0.32
TMEM260-203ENST00000539559 LHX2P50458 406 aa17.07■□□□□ 0.32
TMEM260-203ENST00000539559 MRPL41Q8IXM3 137 aaKnown RBP17.07■□□□□ 0.32
TMEM260-203ENST00000539559 DDA1Q9BW61 102 aa17.07■□□□□ 0.32
TMEM260-203ENST00000539559 COL8A2P25067 703 aa17.06■□□□□ 0.32
TMEM260-203ENST00000539559 OR2T10Q8NGZ9 312 aa17.06■□□□□ 0.32
TMEM260-203ENST00000539559 DERL1Q9BUN8 251 aa17.06■□□□□ 0.32
TMEM260-203ENST00000539559 ACTR3CQ9C0K3 210 aaPredicted RBP17.06■□□□□ 0.32
TMEM260-203ENST00000539559 COL27A1Q8IZC6 1860 aaPredicted RBP17.06■□□□□ 0.32
TMEM260-203ENST00000539559 CDIPTO14735 213 aa17.06■□□□□ 0.32
TMEM260-203ENST00000539559 MAGEA5P43359 124 aa17.06■□□□□ 0.32
TMEM260-203ENST00000539559 FAM78BQ5VT40 261 aa17.06■□□□□ 0.32
TMEM260-203ENST00000539559 TIPARPQ7Z3E1 657 aaKnown RBP17.06■□□□□ 0.32
TMEM260-203ENST00000539559 TMEM170AQ8WVE7 144 aa17.06■□□□□ 0.32
TMEM260-203ENST00000539559 OR2D2Q9H210 308 aa17.06■□□□□ 0.32
TMEM260-203ENST00000539559 CTXND1A0A1B0GTU2 59 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 ODAMA1E959 279 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 S1PR2O95136 353 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 PLP2Q04941 152 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 ALKBH6Q3KRA9 238 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 ZNF497Q6ZNH5 498 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 CT55Q8WUE5 264 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 RBMXL2O75526 392 aaKnown RBP17.05■□□□□ 0.32
TMEM260-203ENST00000539559 CLDN18P56856 261 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 OR52L2PQ8NGH6 319 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 APH1AQ96BI3 265 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 WDYHV1Q96HA8 205 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 C2orf88Q9BSF0 95 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 TMEM204Q9BSN7 226 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 NDUFAF3Q9BU61 184 aa17.05■□□□□ 0.32
TMEM260-203ENST00000539559 IGKV3D-15A0A087WSY6 115 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 SSPNQ14714 243 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms