RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 TCEAL3Q969E4 200 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 BORCS7Q96B45 105 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 ATXN7L3BQ96GX2 97 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 OR52E6Q96RD3 313 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 SEC22CQ9BRL7 303 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 GINS3Q9BRX5 216 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 CHST5Q9GZS9 411 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 DEFB127Q9H1M4 99 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 TMEM100Q9NV29 134 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 ZNF226Q9NYT6 803 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 CLCF1Q9UBD9 225 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 UGT2A1Q9Y4X1 527 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 MUC2Q02817 5179 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 SONP18583 2426 aaKnown RBP2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 COL7A1Q02388 2944 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 ASTN1O14525 1302 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 C2orf16Q68DN1 1984 aa2.91□□□□□ -1.94
AC055720.1-201ENST00000539552 NUP205Q92621 2012 aa2.9□□□□□ -1.94
AC055720.1-201ENST00000539552 NOTCH4Q99466 2003 aa2.9□□□□□ -1.94
AC055720.1-201ENST00000539552 A0A087WWV3 80 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 IGHV7-81A0A0B4J1V7 117 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 MYL12BO14950 172 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 ORC5O43913 435 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 NDUFS5O43920 106 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 PDE6DO43924 150 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 PDCD6O75340 191 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 YIF1AO95070 293 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 CRYZL1O95825 349 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 IGKV3-20P01619 116 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 TTRP02766 147 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 REG1AP05451 166 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 CSF3P09919 207 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 ZNF806P0C7X5 589 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 LAMP1P11279 417 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 CD1EP15812 388 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 SPNP16150 400 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 ZNF708P17019 499 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 RAB3BP20337 219 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 FMO3P31513 532 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 PSMB2P49721 201 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 NDUFA8P51970 172 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 H2BFSP57053 126 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 RPS21P63220 83 aaKnown RBP2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 FZD2Q14332 565 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 LRRC36Q1X8D7 754 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 ZNF684Q5T5D7 378 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 TSPO2Q5TGU0 170 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 RSBN1Q5VWQ0 802 aaPredicted RBP2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 ELP2Q6IA86 826 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 RPL13AP3Q6NVV1 102 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 ZFP1Q6P2D0 407 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 PAMR1Q6UXH9 720 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 CLEC19AQ6UXS0 136 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 NAA40Q86UY6 237 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 EIF4E3Q8N5X7 224 aaKnown RBP2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 ZNF614Q8N883 585 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 NKAPP1Q8N9T2 125 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 OR2M7Q8NG81 312 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 OR1N2Q8NGR9 330 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 OR2K2Q8NGT1 345 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 OR1S1Q8NH92 325 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 LMO3Q8TAP4 145 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 CD200R1Q8TD46 325 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 IL22RA2Q969J5 263 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 PFDN5Q99471 154 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 MARVELD1Q9BSK0 173 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 SPNS1Q9H2V7 528 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 ZSCAN16Q9H4T2 348 aaPredicted RBP2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 WFDC1Q9HC57 220 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 UBQLN4Q9NRR5 601 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 HEBP1Q9NRV9 189 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 PYCARDQ9ULZ3 195 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 YTHDF2Q9Y5A9 579 aaKnown RBP2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 CLUHO75153 1309 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 CCDC171Q6TFL3 1326 aa2.9□□□□□ -1.95
AC055720.1-201ENST00000539552 MYH13Q9UKX3 1938 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 LYSTQ99698 3801 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 PARP14Q460N5 1801 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 FRAS1Q86XX4 4008 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 FAM183AA6NL82 134 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 LINC00587B1AMM8 73 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 D6RAR5 112 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 UPK2O00526 184 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 SNAP91O60641 907 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 ARL6IP5O75915 188 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 OR8U8P0C7N1 319 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 CXCL2P19875 107 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 CXCL3P19876 107 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 ERP29P30040 261 aaKnown RBP2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 DDTP30046 118 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 CD70P32970 193 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 PRSS3P35030 304 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 BTCP35070 178 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 DRD3P35462 400 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 SLC18A1P54219 525 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 HSPE1P61604 102 aaKnown RBP2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 RHOBP62745 196 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 C16orf72Q14CZ0 275 aa2.89□□□□□ -1.95
AC055720.1-201ENST00000539552 IRF4Q15306 451 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms