RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 A8MWP6 167 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 C1QTNF9BB2RNN3 333 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 TFF1P04155 84 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 SP1P08047 785 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 GALR1P47211 349 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 WDR86Q86TI4 376 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 MED12LQ86YW9 2145 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 MKXQ8IYA7 352 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 OR51G1Q8NGK1 321 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 SMG1Q96Q15 3661 aaKnown RBP10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 IGLV2-14P01704 120 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 HBE1P02100 147 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 CELA3BP08861 270 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 UCP1P25874 307 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 ZNF324BQ6AW86 544 aaPredicted RBP10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM185AQ8N0U4 392 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 MDS2Q8NDY4 140 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 MSL2Q9HCI7 577 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 PITPNC1Q9UKF7 332 aa10.61□□□□□ -0.71
SFSWAP-208ENST00000539506 NUPR1O60356 82 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 WISP2O76076 250 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 MT-CO3P00414 261 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 IGKV1-39P01597 117 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 IGKV1D-39P04432 117 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 ARR3P36575 388 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 CD81P60033 236 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 DHRS13Q6UX07 377 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 TMEM256Q8N2U0 113 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 RPP25LQ8N5L8 163 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 GP6Q9HCN6 339 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 SPRR3Q9UBC9 169 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 C21orf140B9A014 251 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 PPP5D1E7EU14 171 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 H7BYZ3 331 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 CLDN1O95832 211 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 F2RP25116 425 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 MDH2P40926 338 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 RPL29P47914 159 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 TEX38Q6PEX7 206 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 TCF23Q7RTU1 214 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 MDP1Q86V88 176 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 TMEM183AQ8IXX5 376 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 OR51I2Q9H344 312 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 DLL3Q9NYJ7 618 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 CLEC18AA5D8T8 446 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 KRASP01116 189 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 SP9P0CG40 484 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 TGFBR3Q03167 851 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 IL24Q13007 206 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 JOSD1Q15040 202 aaPredicted RBP10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 BSXQ3C1V8 233 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 BTNL3Q6UXE8 466 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 ZNF808Q8N4W9 903 aaPredicted RBP10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 CLEC18CQ8NCF0 446 aa10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 BCL2L2Q92843 193 aaPredicted RBP10.6□□□□□ -0.71
SFSWAP-208ENST00000539506 GRIFINA4D1Z8 144 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 RBMXL2O75526 392 aaKnown RBP10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 FGF7P21781 194 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 TMEM241Q24JQ0 296 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 ALKBH6Q3KRA9 238 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 TDRG1Q3Y452 100 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 Q6P435 159 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM58AQ8N1B3 248 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 OR13D1Q8NGV5 346 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 IL22RA2Q969J5 263 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 SDSLQ96GA7 329 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 ZNF705FA8MVS1 300 aaPredicted RBP10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 SIRPB1O00241 398 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 SYNGR2O43760 224 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 ZNF705DP0CH99 300 aaPredicted RBP10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 ZNF705BP0CI00 300 aaPredicted RBP10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 RPL23P62829 140 aaKnown RBP10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 SRPXP78539 464 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 GCSAMLQ5JQS6 135 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 ZNF525Q8N782 197 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 WDYHV1Q96HA8 205 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 SNHG12Q9BXW3 62 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 CISD1Q9NZ45 108 aaKnown RBP10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 CLN8Q9UBY8 286 aa10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 RP1L1Q8IWN7 2480 aaPredicted RBP10.59□□□□□ -0.71
SFSWAP-208ENST00000539506 KIR2DS1A0A191URI9 304 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 PAGE4O60829 102 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 KIR2DS4P43632 304 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 ZNF816Q0VGE8 651 aaPredicted RBP10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 KIR2DS1Q14954 304 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 RNPS1Q15287 305 aaKnown RBP10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 SP5Q6BEB4 398 aaPredicted RBP10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 H1FOOQ8IZA3 346 aaPredicted RBP10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 OR10J5Q8NHC4 309 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 PARLQ9H300 379 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 SMDT1Q9H4I9 107 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 ANKRD30BLA7E2S9 258 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 IGKV1-5P01602 117 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 ZNF25P17030 456 aaPredicted RBP10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 CEBPDP49716 269 aaPredicted RBP10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 PAX5Q02548 391 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 PLP2Q04941 152 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms