RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 OR11H2Q8NH07 326 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 GATAD1Q8WUU5 269 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 RARRES3Q9UL19 164 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 HEBP2Q9Y5Z4 205 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 COL4A6Q14031 1691 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 UBE2L5PA0A1B0GUS4 154 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 HSBP1O75506 76 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 CELA3BP08861 270 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 CX3CL1P78423 397 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 DLX2Q07687 328 aaPredicted RBP10.56□□□□□ -0.72
USP3-203ENST00000538686 TMEM211Q6ICI0 200 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 ACSM6Q6P461 480 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 MMD2Q8IY49 270 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 GATSQ8NAP1 163 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 OR2K2Q8NGT1 345 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 ZFYVE21Q9BQ24 234 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 TIMM29Q9BSF4 260 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 TMEM204Q9BSN7 226 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 DNAJC5Q9H3Z4 198 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 HES4Q9HCC6 221 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 KCNIP1Q9NZI2 227 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 PCNX3Q9H6A9 2034 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 NPIPA5E9PKD4 350 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 K7EQM0 130 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 CRXO43186 299 aaPredicted RBP10.55□□□□□ -0.72
USP3-203ENST00000538686 ZNF207O43670 478 aaKnown RBP10.55□□□□□ -0.72
USP3-203ENST00000538686 SERPINE2P07093 398 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 FCGR2AP12318 317 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 HLA-DOBP13765 273 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 CD1BP29016 333 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 SRIP30626 198 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 ZNF121P58317 390 aaPredicted RBP10.55□□□□□ -0.72
USP3-203ENST00000538686 SLC38A11Q08AI6 406 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 TMEM136Q6ZRR5 245 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 RAB1CQ92928 201 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 ZNF501Q96CX3 271 aaPredicted RBP10.55□□□□□ -0.72
USP3-203ENST00000538686 KCNK17Q96T54 332 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 SPATA25Q9BR10 227 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 TMEM70Q9BUB7 260 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 VN1R3Q9BXE9 311 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 PILRAQ9UKJ1 303 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 NPIPA1Q9UND3 350 aa10.55□□□□□ -0.72
USP3-203ENST00000538686 GAGE12HA6NDE8 117 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 M0R2Z0 102 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 TSPAN13O95857 204 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 AMY1AP04745 511 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 GPR183P32249 361 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 CA7P43166 264 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 OR1D4P47884 311 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 SEC13P55735 322 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 ARL16Q0P5N6 197 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 CRIP3Q6Q6R5 217 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 SYT13Q7L8C5 426 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 CA13Q8N1Q1 262 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 ZNF114Q8NC26 417 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 LSM10Q969L4 123 aaKnown RBP10.54□□□□□ -0.72
USP3-203ENST00000538686 GP6Q9HCN6 339 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 PGPEP1Q9NXJ5 209 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 OR4C46A6NHA9 309 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 C9JCJ5 164 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 H0Y8G0 127 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 NAPSAO96009 420 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 CLDN17P56750 224 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 RPS18P62269 152 aaKnown RBP10.54□□□□□ -0.72
USP3-203ENST00000538686 MYBPHQ13203 477 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 DGAT2L6Q6ZPD8 337 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 FAM19A2Q8N3H0 131 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 CYB5D2Q8WUJ1 264 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 NAT6Q93015 286 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 TMEM147Q9BVK8 224 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 FNDC4Q9H6D8 234 aaPredicted RBP10.54□□□□□ -0.72
USP3-203ENST00000538686 GEMIN7Q9H840 131 aaKnown RBP10.54□□□□□ -0.72
USP3-203ENST00000538686 IL21Q9HBE4 155 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 SLC7A10Q9NS82 523 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 TMEM74BQ9NUR3 256 aa10.54□□□□□ -0.72
USP3-203ENST00000538686 KLRC4-KLRK1H3BQV0 150 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 F2RL2O00254 374 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 HMGB3O15347 200 aaKnown RBP10.53□□□□□ -0.72
USP3-203ENST00000538686 NXPH3O95157 252 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 GP1BBP13224 206 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 GRB2P62993 217 aaKnown RBP10.53□□□□□ -0.72
USP3-203ENST00000538686 SRSF7Q16629 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
USP3-203ENST00000538686 PRAMEF5Q5TYX0 476 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 PRAMEF6Q5VXH4 476 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 Q6ZS49 121 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 C18orf32Q8TCD1 76 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 RERGQ96A58 199 aaPredicted RBP10.53□□□□□ -0.72
USP3-203ENST00000538686 TMEM191AQ9H0A3 160 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 SCRT2Q9NQ03 307 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 SNRNP200O75643 2136 aaKnown RBP10.53□□□□□ -0.72
USP3-203ENST00000538686 A0A1W2PR80 420 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 C2orf70A6NJV1 201 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 BMPR1BO00238 502 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 DRD1P21728 446 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 PTGDSP41222 190 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 TLE1Q04724 770 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 EBLN2Q6P2I7 272 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 RASL11AQ6T310 242 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 TMEM25Q86YD3 366 aa10.53□□□□□ -0.72
USP3-203ENST00000538686 OCC1Q8TAD7 63 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms