RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PARD6AQ9NPB6 346 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 TCL1AP56279 114 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 RANP62826 216 aaKnown RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 TMEM241Q24JQ0 296 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 UNQ9370/PRO34162Q6UXP9 181 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 MMD2Q8IY49 270 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 TCTE3Q8IZS6 198 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 ZNF418Q8TF45 676 aaPredicted RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 RBKSQ9H477 322 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 IGHV3-35A0A0C4DH35 117 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 C1QTNF9BB2RNN3 333 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 HYPMO75409 117 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 IGKV1D-33P01593 117 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 IGKV1-33P01594 117 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 C1QTNF9P0C862 333 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 KRTDAPP60985 99 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 NHLRC2Q8NBF2 726 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 OR1L6Q8NGR2 347 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 NOL4LQ96MY1 436 aaPredicted RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 MMP26Q9NRE1 261 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 SLC2A8Q9NY64 477 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 NAT8BQ9UHF3 227 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 S4R3C0 116 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 TRBV5-5A0A0J9YX44 114 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 C11orf94C9JXX5 98 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 THBDP07204 575 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 FAM157CP0CG43 387 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 FCGR2BP31994 310 aaPredicted RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 PLAURQ03405 335 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 PEAR1Q5VY43 1037 aaPredicted RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 PAXXQ9BUH6 204 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 TMEM140Q9NV12 185 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 MRPS18CQ9Y3D5 142 aaKnown RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 BMPR1BO00238 502 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 P01737 135 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 TRGV3P03979 118 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 LINC00271P0C7V0 271 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 SULT1A1P50225 295 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 RPL39P5Q59GN2 51 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 TMEM88Q6PEY1 159 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 ZNF680Q8NEM1 530 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 EEF1AKMT3Q96AZ1 226 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 JPT1Q9UK76 154 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 KNTC1P50748 2209 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 IGHV3-66A0A0C4DH42 116 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 SRSF10O75494 262 aaKnown RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 PGLYRP1O75594 196 aaPredicted RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 IGKV3-20P01619 116 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 IGHV3-48P01763 117 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 PTGDSP41222 190 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 MFAP4P55083 255 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 Q1RN00 199 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 SAXO1Q8IYX7 474 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 PRSS3P2Q8NHM4 247 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 TMEM186Q96B77 213 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 MANBALQ9NQG1 85 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 IL36RNQ9UBH0 155 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 ELF5Q9UKW6 265 aaPredicted RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 FAM181BA6NEQ2 426 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 C17orf100A8MU93 164 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 IGF2P01344 180 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 MBPP02686 304 aaPredicted RBP4.56□□□□□ -1.68
LRP6-203ENST00000538239 COL8A1P27658 744 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 OR10J1P30954 320 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 TUSC1Q2TAM9 212 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 MRPL37Q9BZE1 423 aaKnown RBP4.56□□□□□ -1.68
LRP6-203ENST00000538239 MSRB2Q9Y3D2 182 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 KIAA1324LA8MWY0 1029 aaPredicted RBP4.56□□□□□ -1.68
LRP6-203ENST00000538239 KLF4O43474 513 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 OR2A4O95047 310 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 MUC1P15941 1255 aaPredicted RBP4.56□□□□□ -1.68
LRP6-203ENST00000538239 Q0VFX4 171 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 FAM162BQ5T6X4 162 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 TEX261Q6UWH6 196 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 AQP3Q92482 292 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 OR2A7Q96R45 310 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 U3KQ87 197 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 H0Y980 276 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 NHLH1Q02575 133 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 PSG7Q13046 419 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 ANKRD55Q3KP44 614 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 TMEM255AQ5JRV8 349 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 ZNF426Q9BUY5 554 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 RTN4RQ9BZR6 473 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 FRMPD3Q5JV73 1810 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 NPIPB11E5RHQ5 1161 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 S1PR2O95136 353 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 TFF1P04155 84 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 CSN3P07498 182 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 RD3LP0DJH9 198 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 FABP4P15090 132 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 CD1BP29016 333 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 NSUN5P1Q3KNT7 163 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 COLCA1Q6ZS62 124 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 OR52M1Q8NGK5 317 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 OR4C13Q8NGP0 309 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 VWA8A3KMH1 1905 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 IGHV1-18A0A0C4DH31 117 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 CRXO43186 299 aaPredicted RBP4.56□□□□□ -1.68
LRP6-203ENST00000538239 PAGE4O60829 102 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms