RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 GPR183P32249 361 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 CLDN17P56750 224 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 TGFBR3Q03167 851 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 POM121L1PQ3SYA9 428 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 FA2HQ7L5A8 372 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 OR4A5Q8NH83 315 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 NT5CQ8TCD5 201 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 ST6GALNAC6Q969X2 333 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 ZNF501Q96CX3 271 aaPredicted RBP7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 TMEM70Q9BUB7 260 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 LINC00470Q9BZP3 86 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 MPDZO75970 2070 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 F2RL2O00254 374 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 PPYP01298 95 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 IGKV1D-33P01593 117 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 IGKV1-33P01594 117 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 HLA-DQA1P01909 254 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 STAG3L2P0CL84 134 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 USF1P22415 310 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 GATA2P23769 480 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 DOK3Q7L591 496 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 C1QL2Q7Z5L3 287 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 MMD2Q8IY49 270 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 TSTD1Q8NFU3 115 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 OR10AG1Q8NH19 301 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 DPF1Q92782 380 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 OR4C12Q96R67 309 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 PMCHL2Q9BQD1 86 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 SPATA25Q9BR10 227 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 PSENENQ9NZ42 101 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 COPS7AQ9UBW8 275 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 ARID1BQ8NFD5 2236 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 ANKRD30BLA7E2S9 258 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 NUDT14O95848 222 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 NAPSAO96009 420 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 CYB561P49447 251 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 RPS18P62269 152 aaKnown RBP7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 DLX2Q07687 328 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 SRSF7Q16629 238 aaKnown RBP eCLIP7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 CDCP2Q5VXM1 449 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 VN1R4Q7Z5H5 301 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 VSTM2AQ8TAG5 236 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 VN1R3Q9BXE9 311 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 TSSC4Q9Y5U2 329 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 DOCK11Q5JSL3 2073 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 SCN3AQ9NY46 2000 aa7.25□□□□□ -1.25
SRGAP1-202ENST00000537556 C2orf72A6NCS6 295 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 NPIPA5E9PKD4 350 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 NPIPA3F8WFD2 350 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 RHBDL1O75783 438 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 IGHMP01871 453 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 HLA-DOBP13765 273 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 PEBP1P30086 187 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 FABP6P51161 128 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 MYBPHQ13203 477 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 RNPS1Q15287 305 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 CLLU1OSQ5K130 101 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 PLCXD3Q63HM9 321 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 ZNF114Q8NC26 417 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 Q96M66 194 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 MS4A6AQ9H2W1 248 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 MRPL16Q9NX20 251 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 NPIPA1Q9UND3 350 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 UBE2L5PA0A1B0GUS4 154 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 TEX48A0A1B0GUV7 120 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 PGPEP1LA6NFU8 196 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 SYNGR2O43760 224 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 SMIM10L1P0DMW3 83 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 HTR1DP28221 377 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 SSTR5P35346 364 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 KIAA1644Q3SXP7 199 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 EBLN2Q6P2I7 272 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 GATSQ8NAP1 163 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 OR5D13Q8NGL4 314 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 SMIM10Q96HG1 83 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 IL36GQ9NZH8 169 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 C1RLQ9NZP8 487 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 FREM3P0C091 2139 aa7.24□□□□□ -1.25
SRGAP1-202ENST00000537556 IGKV1-9A0A0C4DH69 117 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 LIPT2A6NK58 231 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 H3BUT2 72 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 CRYAAP02489 173 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 APOA2P02652 100 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 ADH4P08319 380 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 EGR1P18146 543 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 CX3CL1P78423 397 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 OR8B8Q15620 311 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 TMEM97Q5BJF2 176 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 TMEM136Q6ZRR5 245 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 OCC1Q8TAD7 63 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 C18orf32Q8TCD1 76 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 BLNKQ8WV28 456 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 NAT6Q93015 286 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 LSM10Q969L4 123 aaKnown RBP7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 SPSB4Q96A44 273 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 VSTM2LQ96N03 204 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 FAM110AQ9BQ89 295 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 PHF7Q9BWX1 381 aaPredicted RBP7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 TMEM191AQ9H0A3 160 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 FGF21Q9NSA1 209 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms