RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 GPHA2Q96T91 129 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 B3GAT1Q9P2W7 334 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 THSD7BQ9C0I4 1608 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FCGR3BO75015 233 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 HIST1H1EP10412 219 aaKnown RBP4.66□□□□□ -1.66
PTPRD-213ENST00000537002 BCL3P20749 454 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 CBLN1P23435 193 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 PRRX1P54821 245 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FHL1Q13642 323 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 SPSB3Q6PJ21 355 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM52Q8NDY8 209 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 S1PR3Q99500 378 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 LOC101059948A0A1B0GTJ6 334 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 Q0VG73 95 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 HYAL1Q12794 435 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FXYD3Q14802 87 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 SRSF7Q16629 238 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTPRD-213ENST00000537002 KMT5CQ86Y97 462 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-213ENST00000537002 CLN8Q9UBY8 286 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 LY96Q9Y6Y9 160 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 C4orf51C9J302 202 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 TIAF1O95411 115 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FABP2P12104 132 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 EGR1P18146 543 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 NMUP48645 174 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 YPEL3P61236 119 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-213ENST00000537002 CCL20P78556 96 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 MRPS21P82921 87 aaKnown RBP4.66□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM187Q14656 261 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 EXT1Q16394 746 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FBLN7Q53RD9 439 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 SPATA46Q5T0L3 261 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FAM90A2PQ658T7 463 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 TEX38Q6PEX7 206 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 ABHD3Q8WU67 409 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM222Q9H0R3 208 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 A0A1B0GX78 115 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 TMPRSS2O15393 492 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM56Q96MV1 263 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 PMCHL2Q9BQD1 86 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 COX11Q9Y6N1 276 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM56-RWDD3S4R434 201 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 C5orf67F2Z3F1 127 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 MUC15Q8N387 334 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 ELSPBP1Q96BH3 223 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 FGF21Q9NSA1 209 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 PSG11Q9UQ72 335 aa4.66□□□□□ -1.66
PTPRD-213ENST00000537002 POLR3KQ9Y2Y1 108 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-213ENST00000537002 RAMP3O60896 148 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 GNB1P62873 340 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 UBE2L3P68036 154 aaKnown RBP4.65□□□□□ -1.66
PTPRD-213ENST00000537002 PSG3Q16557 428 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 C5orf24Q7Z6I8 188 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 SELENOHQ8IZQ5 122 aaKnown RBP4.65□□□□□ -1.66
PTPRD-213ENST00000537002 OR8B3Q8NGG8 313 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 APOBEC3DQ96AK3 386 aaPredicted RBP4.65□□□□□ -1.66
PTPRD-213ENST00000537002 HELTA6NFD8 242 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 H3BVH4 76 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 TNFSF14O43557 240 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 CXCL13O43927 109 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 VAMP5O95183 116 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 FAM87AP0C7U9 286 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 UNC119Q13432 240 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM211Q6ICI0 200 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 BMPERQ8N8U9 685 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 OR2Y1Q8NGV0 311 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 OR1L3Q8NH93 324 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM190Q8WZ59 177 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 TRAV38-1A0A0B4J264 116 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 A0A1W2PQD3 144 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 SUMO3P55854 103 aaPredicted RBP4.65□□□□□ -1.66
PTPRD-213ENST00000537002 OR1D5P58170 312 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 YPEL5P62699 121 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 LDLRAD2Q5SZI1 272 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 CXorf67Q86X51 503 aaPredicted RBP4.65□□□□□ -1.66
PTPRD-213ENST00000537002 NIT1Q86X76 327 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 C1orf174Q8IYL3 243 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 SPEM1Q8N4L4 309 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 GALMQ96C23 342 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM140Q9NV12 185 aa4.65□□□□□ -1.66
PTPRD-213ENST00000537002 ISLRO14498 428 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 AMY1AP04745 511 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 WNT2P09544 360 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 IL11P20809 199 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 CCL1P22362 96 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 GFERP55789 205 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 TBC1D28Q2M2D7 210 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 HES3Q5TGS1 186 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 TCF23Q7RTU1 214 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 CNEP1R1Q8N9A8 125 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 OR6C1Q96RD1 312 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 ABHD14AQ9BUJ0 271 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 MRPL27Q9P0M9 148 aaKnown RBP4.65□□□□□ -1.67
PTPRD-213ENST00000537002 SAA2-SAA4A0A096LPE2 208 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 OR4C46A6NHA9 309 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 H0YIG0 161 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 GALR2O43603 387 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-213ENST00000537002 SNAI2O43623 268 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms