RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 DYNLT3P51808 116 aa11.33□□□□□ -0.6
SMG6-203ENST00000536871 HSD17B11Q8NBQ5 300 aa11.33□□□□□ -0.6
SMG6-203ENST00000536871 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.33□□□□□ -0.6
SMG6-203ENST00000536871 BSCL2Q96G97 398 aaPredicted RBP11.33□□□□□ -0.6
SMG6-203ENST00000536871 PPP1R14DQ9NXH3 145 aa11.33□□□□□ -0.6
SMG6-203ENST00000536871 CNOT1A5YKK6 2376 aaKnown RBP11.33□□□□□ -0.6
SMG6-203ENST00000536871 ESPL1Q14674 2120 aa11.33□□□□□ -0.6
SMG6-203ENST00000536871 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.62e-6■■■■□ 23.3
SMG6-203ENST00000536871 IGHV1-46P01743 117 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 ATP6V0CP27449 155 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 CASP6P55212 293 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 CLINT1Q14677 625 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
SMG6-203ENST00000536871 OR2G3Q8NGZ4 309 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 TCTEX1D2Q8WW35 142 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 RND1Q92730 232 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 VKORC1Q9BQB6 163 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 ZNF665Q9H7R5 613 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 GCM1Q9NP62 436 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 PSENENQ9NZ42 101 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 HSPB7Q9UBY9 170 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 METRNQ9UJH8 293 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 DMRT1Q9Y5R6 373 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 KPTNQ9Y664 436 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 INTS1Q8N201 2190 aaKnown RBP11.32□□□□□ -0.6
SMG6-203ENST00000536871 TMEM50AO95807 157 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 HBE1P02100 147 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 CRYBA1P05813 215 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 CCKARP32238 428 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 SSTR5P35346 364 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 PPP1CCP36873 323 aaKnown RBP11.32□□□□□ -0.6
SMG6-203ENST00000536871 SNCAP37840 140 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 GPR12P47775 334 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 ZNF616Q08AN1 781 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 EDDM3AQ14507 147 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 ATP6V1FQ16864 119 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 MORN2Q502X0 79 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 CLEC9AQ6UXN8 241 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 C15orf54Q8N8G6 183 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 SCGB1C1Q8TD33 95 aa11.32□□□□□ -0.6
SMG6-203ENST00000536871 PARP12Q9H0J9 701 aaKnown RBP11.32□□□□□ -0.6
SMG6-203ENST00000536871 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 P0C879 139 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 OMGP23515 440 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 UBE2KP61086 200 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 TLE4Q04727 773 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 TNFRSF9Q07011 255 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 TEX36Q5VZQ5 186 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 STUMQ69YW2 141 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 SLC25A24Q6NUK1 477 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 Q6ZRM9 215 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 C1orf87Q8N0U7 546 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 BOLLQ8N9W6 283 aaKnown RBP11.31□□□□□ -0.6
SMG6-203ENST00000536871 UBALD1Q8TB05 177 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 SNRNP40Q96DI7 357 aaKnown RBP11.31□□□□□ -0.6
SMG6-203ENST00000536871 AGMATQ9BSE5 352 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
SMG6-203ENST00000536871 NIT2Q9NQR4 276 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 GTF3C1Q12789 2109 aa11.31□□□□□ -0.6
SMG6-203ENST00000536871 MEX3AA1L020 520 aaKnown RBP11.3□□□□□ -0.6
SMG6-203ENST00000536871 C1orf196B1AJZ1 125 aa11.3□□□□□ -0.6
SMG6-203ENST00000536871 CST7O76096 145 aa11.3□□□□□ -0.6
SMG6-203ENST00000536871 AKR1C8PQ5T2L2 129 aa11.3□□□□□ -0.6
SMG6-203ENST00000536871 H2BFWTQ7Z2G1 175 aa11.3□□□□□ -0.6
SMG6-203ENST00000536871 PSG11Q9UQ72 335 aa11.3□□□□□ -0.6
SMG6-203ENST00000536871 NKX6-3A6NJ46 265 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 HPRT1P00492 218 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 SERF2P84101 59 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 TMEM182Q6ZP80 229 aaPredicted RBP11.29□□□□□ -0.6
SMG6-203ENST00000536871 WFDC8Q8IUA0 241 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 ZNF808Q8N4W9 903 aaPredicted RBP11.29□□□□□ -0.6
SMG6-203ENST00000536871 TMEM217Q8N7C4 229 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 OR10A7Q8NGE5 316 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 CORO2AQ92828 525 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 ADTRPQ96IZ2 230 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 LINC00574Q9H8X3 128 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 UNKLQ9H9P5 680 aaKnown RBP11.29□□□□□ -0.6
SMG6-203ENST00000536871 CALYQ9NYX4 217 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 MIOXQ9UGB7 285 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 TRAV38-1A0A0B4J264 116 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 KBTBD11-OT1A0A1B0GTJ5 212 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 C17orf100A8MU93 164 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 CGB3P0DN86 165 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 CGB7P0DN87 165 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 CD80P33681 288 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 EDDM3BP56851 147 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 RPL30P62888 115 aaKnown RBP11.29□□□□□ -0.6
SMG6-203ENST00000536871 GUK1Q16774 197 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 DNLZQ5SXM8 178 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 ZNF788Q6ZQV5 615 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 ODF3L1Q8IXM7 274 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 FAM213BQ8TBF2 198 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 RXFP4Q8TDU9 374 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 PINX1Q96BK5 328 aaKnown RBP11.29□□□□□ -0.6
SMG6-203ENST00000536871 RBMXL1Q96E39 390 aaKnown RBP11.29□□□□□ -0.6
SMG6-203ENST00000536871 SH3BGRL3Q9H299 93 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 CLN8Q9UBY8 286 aa11.29□□□□□ -0.6
SMG6-203ENST00000536871 SOX15O60248 233 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms