RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 ZNF732B4DXR9 585 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 PHF1O43189 567 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 DNPH1O43598 174 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A15PP0C7V4 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A13PP0C7W8 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A14PP0C7W9 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A24PP0C7X0 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 OR13C7P0DN81 318 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 OR10J1P30954 320 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 CEACAM8P31997 349 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 NKX2-1P43699 371 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 RPS20P60866 119 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 RND3P61587 244 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 MRPS34P82930 218 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 LYZL2Q7Z4W2 148 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 YRDCQ86U90 279 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 OSR2Q8N2R0 312 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 TNFRSF14Q92956 283 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 TVP23CQ96ET8 276 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAAP24Q9BTP7 215 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 CBLN4Q9NTU7 201 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 PLEK2Q9NYT0 353 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 PUS1Q9Y606 427 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 PRRC2AP48634 2157 aaKnown RBP9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 C3orf85A0A1B0GTC6 90 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 SHISA8B8ZZ34 492 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 PDCD6O75340 191 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 BMP5P22003 454 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 S100GP29377 79 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 BRS3P32247 399 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 FUT6P51993 359 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 PNRC1Q12796 327 aaPredicted RBP9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 ZNF506Q5JVG8 444 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM27BQ5VT28 67 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 OR8G2PQ6IF36 304 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 CFAP161Q6P656 301 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 Q6ZS49 121 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 NUFIP2Q7Z417 695 aaKnown RBP9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 ZNF695Q8IW36 515 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 FBXL14Q8N1E6 418 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 FRZBQ92765 325 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 IL22RA2Q969J5 263 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 WDYHV1Q96HA8 205 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 TRIB1Q96RU8 372 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 C20orf144Q9BQM9 153 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 NIPSNAP3BQ9BS92 247 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 PRDM14Q9GZV8 571 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 PARP12Q9H0J9 701 aaKnown RBP9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 CRIM1Q9NZV1 1036 aa9.88□□□□□ -0.83
CHRNB1-202ENST00000536404 TRBV24-1A0A075B6N3 115 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 H3BQ15 152 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 MPPED1O15442 326 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 XRCC2O43543 280 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 CTXN2P0C2S0 81 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 APOBEC3AP31941 199 aaPredicted RBP9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 RND2P52198 227 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 FXYD4P59646 89 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 PRDX4Q13162 271 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 OR5I1Q13606 314 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 TAF9Q16594 264 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 SP6Q3SY56 376 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 MRPL41Q8IXM3 137 aaKnown RBP9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 OR5L1Q8NGL2 311 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 NABP1Q96AH0 204 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 TMEM56Q96MV1 263 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 MIEN1Q9BRT3 115 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 SF3B5Q9BWJ5 86 aaKnown RBP9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 ULBP2Q9BZM5 246 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 TMEM222Q9H0R3 208 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 LIME1Q9H400 295 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 LYRM2Q9NU23 88 aaPredicted RBP9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 RNF150Q9ULK6 438 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 UBE2J1Q9Y385 318 aaPredicted RBP9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 TMEM56-RWDD3S4R434 201 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 NF1P21359 2839 aa9.87□□□□□ -0.83
CHRNB1-202ENST00000536404 TRAV1-1A0A0B4J248 108 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 SRP19P09132 144 aaKnown RBP9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 CXCL1P09341 107 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 FUT3P21217 361 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 ATP6V0CP27449 155 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 APLNRP35414 380 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 TIMP3P35625 211 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 PDLIM4P50479 330 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 ASCL1P50553 236 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 CEBPGP53567 150 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 PCBD1P61457 104 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 ARF6P62330 175 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 IL24Q13007 206 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 PHLDA2Q53GA4 152 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 RNASE8Q8TDE3 154 aaKnown RBP9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 RNASE6Q93091 150 aaKnown RBP9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 REEP6Q96HR9 211 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 RBM24Q9BX46 236 aaKnown RBP9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 SH3BGRL3Q9H299 93 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 CDH20Q9HBT6 801 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 DOCK7Q96N67 2140 aa9.86□□□□□ -0.83
CHRNB1-202ENST00000536404 TRAV39A0A0B4J263 110 aa9.85□□□□□ -0.83
CHRNB1-202ENST00000536404 MSTNO14793 375 aa9.85□□□□□ -0.83
CHRNB1-202ENST00000536404 NRASP01111 189 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms