RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 MRPS21P82921 87 aaKnown RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 IGFBP7Q16270 282 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 ZNF74Q16587 644 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 ACSF3Q4G176 576 aaPredicted RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 LRRC10Q5BKY1 277 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CT45A2Q5DJT8 189 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 PHF19Q5T6S3 580 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 LINC00696Q6ZRV3 163 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 BHLHA15Q7RTS1 189 aaPredicted RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 LHFPL1Q86WI0 220 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 COMMD2Q86X83 199 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 ZDHHC23Q8IYP9 409 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 MRPL30Q8TCC3 161 aaKnown RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 RNF183Q96D59 192 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 SIGMAR1Q99720 223 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CTDSP1Q9GZU7 261 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 SERTAD4Q9NUC0 356 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 MUC22E2RYF6 1773 aaPredicted RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 A0A0A6YYD5 115 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 C5orf63A6NC05 138 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 SNURFLB1AK76 121 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CHST1O43916 411 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 PAGE4O60829 102 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 ZNF253O75346 499 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 NEURL1O76050 574 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 KBTBD11O94819 623 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 TOX4O94842 621 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CLDN1O95832 211 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 NAPSAO96009 420 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 HIST1H1DP16402 221 aaKnown RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 IGFBP3P17936 291 aaPredicted RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 IGFBP2P18065 325 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 INSL3P51460 131 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 PPP1CBP62140 327 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 QRFPP83859 136 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 ARL16Q0P5N6 197 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 RAB31Q13636 194 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 TMEM187Q14656 261 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 ZNF141Q15928 474 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 SPIN3Q5JUX0 258 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 PMS2CLQ68D20 193 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 FAM71F2Q6NXP2 309 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 EBLN2Q6P2I7 272 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 SLC23A3Q6PIS1 610 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CYP2G1PQ6ZSU1 146 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 TMEM116Q8NCL8 245 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 OR8G5Q8NG78 346 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CXorf40AQ8TE69 158 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 C11orf40Q8WZ69 217 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 OVCA2Q8WZ82 227 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 SPACA9Q96E40 222 aaPredicted RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 KLHDC7BQ96G42 594 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 TSPAN32Q96QS1 320 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 NUDT16L1Q9BRJ7 211 aaKnown RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 TECRQ9NZ01 308 aaKnown RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 ZNF835Q9Y2P0 537 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 R4GN57 208 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 WDR87Q6ZQQ6 2873 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 IGKV1-8A0A0C4DH67 115 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 C7orf71A4D174 169 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 CRYM-AS1A6NIL9 109 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 B5MCH6 92 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 H0YIG0 161 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 HRKO00198 91 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 ADAM20O43506 726 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 SLC16A7O60669 478 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 RAMP3O60896 148 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 IGKV1D-16P01601 117 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 CT62P0C5K7 136 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 SLC25A6P12236 298 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 PGCP20142 388 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 SPINK2P20155 84 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 ATP5G3P48201 142 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 TMPRSS3P57727 454 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 ZNF117Q03924 483 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 FMODQ06828 376 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 CD226Q15762 336 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 ALG10Q5BKT4 473 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 STUMQ69YW2 141 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 DGAT2L6Q6ZPD8 337 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 UEVLDQ8IX04 471 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 C3orf56Q8N813 242 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 OR10P1Q8NGE3 313 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 OR51T1Q8NGJ9 327 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 RNF133Q8WVZ7 376 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 LHX4Q969G2 390 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 RBMXL1Q96E39 390 aaKnown RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 PSG8Q9UQ74 426 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 MRPS16Q9Y3D3 137 aaKnown RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 WNT6Q9Y6F9 365 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 EYSQ5T1H1 3165 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 ZNF850A8MQ14 1090 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 J3KRW8 73 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 M0R1X1 148 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 NDUFB4O95168 129 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 IGLV3-19P01714 112 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 MGST1P10620 155 aaKnown RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 NPY1RP25929 384 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 BLVRBP30043 206 aaPredicted RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 RPS15AP62244 130 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms