RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 RNASEK-C17orf49H0YIS7 233 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 TRAPPC2LH3BP13 241 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 SIRPB1O00241 398 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 PLPP3O14495 311 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 CHP2O43745 196 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 IGHV1-69P01742 117 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 SERPINE1P05121 402 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 PGA4P0DJD7 388 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 PGA3P0DJD8 388 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 IGKV1-13P0DP09 117 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 IDO1P14902 403 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 CRISP2P16562 243 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 CCNOP22674 350 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 ALDH3A1P30838 453 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 OTX1P32242 354 aaPredicted RBP2.78□□□□□ -1.96
MDM2-223ENST00000536089 CFHR2P36980 270 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 CX3CR1P49238 355 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 RPL14P50914 215 aaKnown RBP2.78□□□□□ -1.96
MDM2-223ENST00000536089 ZNF133P52736 654 aaPredicted RBP2.78□□□□□ -1.96
MDM2-223ENST00000536089 NUTF2P61970 127 aaKnown RBP2.78□□□□□ -1.96
MDM2-223ENST00000536089 RAP1AP62834 184 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 ADARB1P78563 741 aaKnown RBP2.78□□□□□ -1.96
MDM2-223ENST00000536089 EMX1Q04741 257 aaPredicted RBP2.78□□□□□ -1.96
MDM2-223ENST00000536089 GLO1Q04760 184 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 DEFB112Q30KQ8 113 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 ZNF404Q494X3 552 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 C2orf83Q53S99 150 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 PABPC1L2AQ5JQF8 200 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 SOHLH1Q5JUK2 328 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 C10orf128Q5T292 105 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 C22orf42Q6IC83 251 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 REEP3Q6NUK4 255 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 TTC33Q6PID6 262 aaPredicted RBP2.78□□□□□ -1.96
MDM2-223ENST00000536089 ZNF621Q6ZSS3 439 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 SSX9Q7RTT3 188 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 CAMK2N1Q7Z7J9 78 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 SLC30A8Q8IWU4 369 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 HSD17B11Q8NBQ5 300 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 OR2Z1Q8NG97 314 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 OR4K5Q8NGD3 323 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 OR4C13Q8NGP0 309 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 OR13G1Q8NGZ3 307 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 SLC25A40Q8TBP6 338 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 SLC35E1Q96K37 410 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 OR2V2Q96R30 315 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 P2RX4Q99571 388 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 WDR55Q9H6Y2 383 aaPredicted RBP2.78□□□□□ -1.96
MDM2-223ENST00000536089 GEMIN7Q9H840 131 aaKnown RBP2.78□□□□□ -1.96
MDM2-223ENST00000536089 TPT1P8Q9HAU6 139 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 VPREB3Q9UKI3 123 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 ANGPT4Q9Y264 503 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 KPTNQ9Y664 436 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 USH1CQ9Y6N9 552 aa2.78□□□□□ -1.96
MDM2-223ENST00000536089 IGKV1D-42A0A075B6H8 117 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 TRAV38-1A0A0B4J264 116 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 ZNF816-ZNF321PA0A0X1KG74 233 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 A8MU10 97 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 PEX7O00628 323 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 BIRC5O15392 142 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 TSPAN13O95857 204 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 PAHP00439 452 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 BGLAPP02818 100 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 BPGMP07738 259 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 CST2P09228 141 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 MMP7P09237 267 aaPredicted RBP2.77□□□□□ -1.97
MDM2-223ENST00000536089 DNAH10OSP0CZ25 163 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 MSR1P21757 451 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 RBM34P42696 430 aaKnown RBP2.77□□□□□ -1.97
MDM2-223ENST00000536089 FGF8P55075 233 aaPredicted RBP2.77□□□□□ -1.97
MDM2-223ENST00000536089 FGF12P61328 243 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 ERVS71-1P61550 626 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 SLC35A2P78381 396 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 CDK6Q00534 326 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 SGCAQ16586 387 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 GUCA2BQ16661 112 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 ZSCAN26Q16670 478 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 HIST3H3Q16695 136 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 THEM4Q5T1C6 240 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 FAM27BQ5VT28 67 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 HHATQ5VTY9 493 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 FBXW12Q6X9E4 464 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 BRD3OSQ6XYD6 125 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 OLIG3Q7RTU3 272 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 NDUFA11Q86Y39 141 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 C4orf33Q8N1A6 199 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 LRRC18Q8N456 261 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 CLDN22Q8N7P3 220 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 TSEN15Q8WW01 171 aaKnown RBP2.77□□□□□ -1.97
MDM2-223ENST00000536089 CAPSLQ8WWF8 208 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 FAM3DQ96BQ1 224 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 TSPAN32Q96QS1 320 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 RBP7Q96R05 134 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 OR5B12Q96R08 314 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 EMC6Q9BV81 110 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 OR2H1Q9GZK4 316 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 OR2J1Q9GZK6 312 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 OR51B6Q9H340 312 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 OR51M1Q9H341 326 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 TMEM165Q9HC07 324 aa2.77□□□□□ -1.97
MDM2-223ENST00000536089 MDFIC2A0A1B0GVS7 189 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms