RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 UBE2L5PA0A1B0GUS4 154 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 CLDN34H7C241 214 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 ZNF737O75373 536 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 CLDN14O95500 239 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 CYB5R3P00387 301 aaPredicted RBP13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 RND2P52198 227 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 BRWD1-AS2P59051 145 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 WDR82Q6UXN9 313 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 WDR31Q8NA23 367 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 LHX4Q969G2 390 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 COQ2Q96H96 371 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 MRPL37Q9BZE1 423 aaKnown RBP13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 OR51M1Q9H341 326 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 ODAMA1E959 279 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 CEBPZOSA8MTT3 80 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 CYB5BO43169 146 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 MBP02144 154 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 COX5AP20674 150 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 KITLGP21583 273 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 GABRA2P47869 451 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 ZNF816Q0VGE8 651 aaPredicted RBP13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 NCMAPQ5T1S8 102 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 ZNF66Q6ZN08 573 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 ZNF808Q8N4W9 903 aaPredicted RBP13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 CNEP1R1Q8N9A8 125 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 C5orf30Q96GV9 206 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 CIB3Q96Q77 187 aaPredicted RBP13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 DOK5Q9P104 306 aa13.43□□□□□ -0.26
CHMP1A-202ENST00000535997 BDP1A6H8Y1 2624 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 RAB29O14966 203 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 S100PP25815 95 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 CD82P27701 267 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 KIR2DL2P43627 348 aaPredicted RBP13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 ELLP55199 621 aaPredicted RBP13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 Q6ZR03 302 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 OR10P1Q8NGE3 313 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 CTDSP1Q9GZU7 261 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 C17orf98A8MV24 154 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 AGFG2O95081 481 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 S1PR2O95136 353 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 WDR25Q64LD2 544 aaPredicted RBP13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 MRGPRDQ8TDS7 321 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 TMEM147Q9BVK8 224 aa13.42□□□□□ -0.26
CHMP1A-202ENST00000535997 CHD3Q12873 2000 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 PMS2P5A8MQ11 134 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 TGOLN2O43493 480 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 TIMM8AO60220 97 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 YIF1AO95070 293 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 CD55P08174 381 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 NDUFA6P56556 154 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 MEF2BQ02080 365 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 PAX5Q02548 391 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 SMIM21Q3B7S5 101 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 OR2B11Q5JQS5 317 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 H2BFWTQ7Z2G1 175 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 DTD1Q8TEA8 209 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 FAM210BQ96KR6 192 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HSD17B10Q99714 261 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 CLN8Q9UBY8 286 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 DOCK11Q5JSL3 2073 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 AQP7O14520 342 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST1H2BKO60814 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 IGKV1D-33P01593 117 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 IGKV1-33P01594 117 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST1H2BJP06899 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST1H2BOP23527 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST1H2BBP33778 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST1H2BDP58876 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST1H2BCP62807 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 TRIP6Q15654 476 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST2H2BEQ16778 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 ZNF718Q3SXZ3 478 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 FAM53AQ6NSI3 398 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 C1orf174Q8IYL3 243 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 C1orf87Q8N0U7 546 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST1H2BHQ93079 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 TAAR6Q96RI8 345 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST1H2BNQ99877 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 HIST1H2BMQ99879 126 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 AGMATQ9BSE5 352 aa13.41□□□□□ -0.26
CHMP1A-202ENST00000535997 NDUFS6O75380 124 aaKnown RBP13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 PTBP3O95758 552 aaKnown RBP13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 TRGC2P03986 189 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 OPN1MWP04001 364 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 OPN1MW2P0DN77 364 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 OPN1MW3P0DN78 364 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 FABP6P51161 128 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 CCL11P51671 97 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 CD81P60033 236 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 BEND4Q6ZU67 534 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 PLSCR4Q9NRQ2 329 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 MIOXQ9UGB7 285 aa13.4□□□□□ -0.26
CHMP1A-202ENST00000535997 TRBV24-1A0A075B6N3 115 aa13.39□□□□□ -0.27
CHMP1A-202ENST00000535997 CTXND1A0A1B0GTU2 59 aa13.39□□□□□ -0.27
CHMP1A-202ENST00000535997 OR5H1A6NKK0 313 aa13.39□□□□□ -0.27
CHMP1A-202ENST00000535997 ADH4P08319 380 aa13.39□□□□□ -0.27
CHMP1A-202ENST00000535997 GCH1P30793 250 aa13.39□□□□□ -0.27
CHMP1A-202ENST00000535997 GNB2P62879 340 aa13.39□□□□□ -0.27
CHMP1A-202ENST00000535997 HTD2P86397 168 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms