RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 LRRC42Q9Y546 428 aa11.34□□□□□ -0.59
CTSB-230ENST00000534149 HERC2O95714 4834 aa11.34□□□□□ -0.59
CTSB-230ENST00000534149 TRBV5-7A0A0A0MS05 114 aa11.33□□□□□ -0.6
CTSB-230ENST00000534149 A0A0G2JLM5 398 aa11.33□□□□□ -0.6
CTSB-230ENST00000534149 H3BUA1 57 aa11.33□□□□□ -0.6
CTSB-230ENST00000534149 CPEP16870 476 aa11.33□□□□□ -0.6
CTSB-230ENST00000534149 CD81P60033 236 aa11.33□□□□□ -0.6
CTSB-230ENST00000534149 MOGAT2Q3SYC2 334 aa11.33□□□□□ -0.6
CTSB-230ENST00000534149 DRAXINQ8NBI3 349 aaPredicted RBP11.33□□□□□ -0.6
CTSB-230ENST00000534149 PGLYRP3Q96LB9 341 aa11.33□□□□□ -0.6
CTSB-230ENST00000534149 RNF5Q99942 180 aa11.33□□□□□ -0.6
CTSB-230ENST00000534149 LOC100130705A0A1B0GUX0 176 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 H3BNX3 289 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 SLC25A17O43808 307 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 CIB2O75838 187 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 DCKP27707 260 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 CAPGP40121 348 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 LINC00205P59089 165 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 RPS16P62249 146 aaKnown RBP11.32□□□□□ -0.6
CTSB-230ENST00000534149 SSBP2P81877 361 aaPredicted RBP11.32□□□□□ -0.6
CTSB-230ENST00000534149 DYRK1AQ13627 763 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 YIF1BQ5BJH7 314 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 RNLSQ5VYX0 342 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 SVOPQ8N4V2 548 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 SETD6Q8TBK2 473 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 LINC00476Q8WZB0 136 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 NEDD4LQ96PU5 975 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 TSNAXQ99598 290 aaKnown RBP11.32□□□□□ -0.6
CTSB-230ENST00000534149 FAAP24Q9BTP7 215 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 SIGLEC8Q9NYZ4 499 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 PEF1Q9UBV8 284 aaKnown RBP11.32□□□□□ -0.6
CTSB-230ENST00000534149 CLEC2DQ9UHP7 191 aa11.32□□□□□ -0.6
CTSB-230ENST00000534149 PNMA8CA0A1B0GUJ8 204 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 RBMY1BA6NDE4 496 aaKnown RBP11.31□□□□□ -0.6
CTSB-230ENST00000534149 RBMY1EA6NEQ0 496 aaKnown RBP11.31□□□□□ -0.6
CTSB-230ENST00000534149 WBP4O75554 376 aaKnown RBP11.31□□□□□ -0.6
CTSB-230ENST00000534149 SPDEFO95238 335 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 CNIH1O95406 144 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 BRI3O95415 125 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 RBMY1DP0C7P1 496 aaKnown RBP11.31□□□□□ -0.6
CTSB-230ENST00000534149 RASSF2P50749 326 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 C6orf201Q7Z4U5 140 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 CDH26Q8IXH8 852 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 DEFB125Q8N687 156 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 NEURL2Q9BR09 285 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 AGMATQ9BSE5 352 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 WFDC10AQ9H1F0 79 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 CHMP1AQ9HD42 196 aaPredicted RBP11.31□□□□□ -0.6
CTSB-230ENST00000534149 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 KMT2AQ03164 3969 aa11.31□□□□□ -0.6
CTSB-230ENST00000534149 PROP1O75360 226 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 TPPPO94811 219 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 CD7P09564 240 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 MYL12AP19105 171 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 PJVKQ0ZLH3 352 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 TATDN3Q17R31 274 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 OR10K2Q6IF99 312 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 ZNF343Q6P1L6 599 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 ZNF383Q8NA42 475 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 BVESQ8NE79 360 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 DERL3Q96Q80 235 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 SLC29A1Q99808 456 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 TINAGL1Q9GZM7 467 aaPredicted RBP11.3□□□□□ -0.6
CTSB-230ENST00000534149 C11orf54Q9H0W9 315 aaPredicted RBP11.3□□□□□ -0.6
CTSB-230ENST00000534149 DNAH10Q8IVF4 4471 aa11.3□□□□□ -0.6
CTSB-230ENST00000534149 DYNC1I1O14576 645 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 ITGB1BP1O14713 200 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 OR2A4O95047 310 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 LY6G6CO95867 125 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 NAPSAO96009 420 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 AADACP22760 399 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 MECP2P51608 486 aaKnown RBP11.29□□□□□ -0.6
CTSB-230ENST00000534149 CD300EQ496F6 205 aaPredicted RBP11.29□□□□□ -0.6
CTSB-230ENST00000534149 ZNF880Q6PDB4 577 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 NKAIN3Q8N8D7 197 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 OR2K2Q8NGT1 345 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 SRD5A3Q9H8P0 318 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 COA4Q9NYJ1 87 aa11.29□□□□□ -0.6
CTSB-230ENST00000534149 DIMT1Q9UNQ2 313 aaKnown RBP11.29□□□□□ -0.6
CTSB-230ENST00000534149 EXOSC1Q9Y3B2 195 aaKnown RBP11.29□□□□□ -0.6
CTSB-230ENST00000534149 RBMXL2O75526 392 aaKnown RBP11.28□□□□□ -0.6
CTSB-230ENST00000534149 APOA2P02652 100 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 APELAP0DMC3 54 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 HTR2CP28335 458 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 CEACAM6P40199 344 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 RPS27AP62979 156 aaKnown RBP11.28□□□□□ -0.6
CTSB-230ENST00000534149 MOB1BQ7L9L4 216 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 EDARADDQ8WWZ3 215 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 NICN1Q9BSH3 213 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 C9orf16Q9BUW7 83 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 KCNK15Q9H427 330 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 PEMTQ9UBM1 199 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 GHRLQ9UBU3 117 aa11.28□□□□□ -0.6
CTSB-230ENST00000534149 ZNF785A8K8V0 405 aa11.27□□□□□ -0.61
CTSB-230ENST00000534149 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms