RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 ALKBH1Q13686 389 aaKnown RBP4.68□□□□□ -1.66
CD44-237ENST00000534082 GNMTQ14749 295 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 PSG5Q15238 335 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 RCN1Q15293 331 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 ELP2Q6IA86 826 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 RBPMS2Q6ZRY4 209 aaKnown RBP4.68□□□□□ -1.66
CD44-237ENST00000534082 SLC38A6Q8IZM9 456 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 UXS1Q8NBZ7 420 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 OR13C9Q8NGT0 318 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 OR10AC1Q8NH08 325 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 OR1L1Q8NH94 360 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 FGGYQ96C11 551 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 TLCD1Q96CP7 247 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 GALNT14Q96FL9 552 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 NDUFAF3Q9BU61 184 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 VCX3BQ9H321 246 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 RAB9BQ9NP90 201 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 MRGBPQ9NV56 204 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 RCC2Q9P258 522 aaKnown RBP4.68□□□□□ -1.66
CD44-237ENST00000534082 MAGEL2Q9UJ55 1249 aa4.68□□□□□ -1.66
CD44-237ENST00000534082 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 OR5H14A6NHG9 310 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 FAM223BA6NKX1 122 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 A8MWP6 167 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 FAM90A23PA8MXZ1 464 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 ZNF670-ZNF695F2Z2N8 137 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 H0YJW9 148 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 H7C2Y5 167 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 NDUFAB1O14561 156 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 SULT1B1O43704 296 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 GMNNO75496 209 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 RBBP9O75884 186 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 OR7C1O76099 320 aaPredicted RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 SPDEFO95238 335 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 MT-ND2P03891 347 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 MT-ND4P03905 459 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 KRT8P05787 483 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 PPP1CCP36873 323 aaKnown RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 MAP2K4P45985 399 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 ADARB1P78563 741 aaKnown RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 RHOGP84095 191 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 GINS1Q14691 196 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 C8orf82Q6P1X6 216 aaPredicted RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 GLDNQ6ZMI3 551 aaPredicted RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 ZNF497Q6ZNH5 498 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 ZNF367Q7RTV3 350 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 FAM223AQ8IWN6 122 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 SLC35F2Q8IXU6 374 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 CENPSQ8N2Z9 138 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 PRSS35Q8N3Z0 413 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 LINC00469Q8N7U9 141 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 Q8NAQ8 132 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 OR13C5Q8NGS8 318 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 OR5B3Q8NH48 314 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 CD300LFQ8TDQ1 290 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 FRZBQ92765 325 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 MRPS24Q96EL2 167 aaKnown RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 SPAG8Q99932 426 aaPredicted RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 NIPSNAP1Q9BPW8 284 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 HOPXQ9BPY8 73 aaPredicted RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 C6orf62Q9GZU0 229 aaPredicted RBP4.67□□□□□ -1.66
CD44-237ENST00000534082 CSTL1Q9H114 145 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 AKIP1Q9NQ31 210 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 SAR1AQ9NR31 198 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 ENOPH1Q9UHY7 261 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 ING4Q9UNL4 249 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 WASHC3Q9Y3C0 194 aa4.67□□□□□ -1.66
CD44-237ENST00000534082 DEFB131BA0A096LNP1 70 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 IGHV4-28A0A0C4DH34 117 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 ZNF320A2RRD8 509 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 H3BNX3 289 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 GGCTO75223 188 aaKnown RBP4.66□□□□□ -1.66
CD44-237ENST00000534082 OR2C1O95371 312 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 IFNA21P01568 189 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 IFNA17P01571 189 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 HMGN1P05114 100 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 RPSAP08865 295 aaKnown RBP4.66□□□□□ -1.66
CD44-237ENST00000534082 APELAP0DMC3 54 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 MNAT1P51948 309 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 ATP5G2Q06055 141 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 RIPK1Q13546 671 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 KISS1Q15726 138 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 MORN2Q502X0 79 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 C6orf141Q5SZD1 244 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 C6orf183Q5T699 404 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 SERTAD4-AS1Q5TG53 156 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 FAM71F2Q6NXP2 309 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 WDR93Q6P2C0 686 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 SSX6Q7RTT6 188 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 SERPINA12Q8IW75 414 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 ADAD2Q8NCV1 583 aaKnown RBP4.66□□□□□ -1.66
CD44-237ENST00000534082 OR10K1Q8NGX5 313 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 NEK7Q8TDX7 302 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 DYDC1Q8WWB3 177 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 FAM46BQ96A09 425 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 TMEM68Q96MH6 324 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 TSNAXQ99598 290 aaKnown RBP4.66□□□□□ -1.66
CD44-237ENST00000534082 SIKE1Q9BRV8 207 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 ALG8Q9BVK2 526 aa4.66□□□□□ -1.66
CD44-237ENST00000534082 SCRT1Q9BWW7 348 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms