RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 IGHV3-72A0A0B4J1Y9 119 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 SYNGR3O43761 229 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 OR8I2Q8N0Y5 310 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 PRSS3P2Q8NHM4 247 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 IL22RA2Q969J5 263 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 TMEM45BQ96B21 275 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 GRAMD2BQ96HH9 432 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 SMDT1Q9H4I9 107 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 IFT22Q9H7X7 185 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 hCG_38984A0A1B0GV85 526 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 SRSF10O75494 262 aaKnown RBP15.04■□□□□ -0
PHRF1-205ENST00000533464 GLIPR1P48060 266 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 MEOX2P50222 304 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 TMEM204Q9BSN7 226 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 LYRM2Q9NU23 88 aaPredicted RBP15.04■□□□□ -0
PHRF1-205ENST00000533464 CALYQ9NYX4 217 aa15.04■□□□□ -0
PHRF1-205ENST00000533464 YTHDF2Q9Y5A9 579 aaKnown RBP15.04■□□□□ -0
PHRF1-205ENST00000533464 AMTP48728 403 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 RANP62826 216 aaKnown RBP15.03■□□□□ -0
PHRF1-205ENST00000533464 Q6ZT83 130 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 PUSL1Q8N0Z8 303 aaKnown RBP15.03■□□□□ -0
PHRF1-205ENST00000533464 C11orf42Q8N5U0 333 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 RBKSQ9H477 322 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 CLEC5AQ9NY25 188 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 RLFQ13129 1914 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 ROS1P08922 2347 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 PGA5P0DJD9 388 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 BMI1P35226 326 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 WNT5AP41221 380 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 OR5P3Q8WZ94 311 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 PERPQ96FX8 193 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 PCGF1Q9BSM1 259 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 ESPL1Q14674 2120 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 A0A087WV48 116 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 Q8WTZ3 238 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 ZDHHC8Q9ULC8 765 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 DOCK4Q8N1I0 1966 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 A0A1B0GTI1 187 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 ZNF253O75346 499 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 MMP7P09237 267 aaPredicted RBP15.03■□□□□ -0
PHRF1-205ENST00000533464 NAT2P11245 290 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 ZP1P60852 638 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 TMEM187Q14656 261 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 KCNMB1Q16558 191 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 NPAS1Q99742 590 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 PXMP4Q9Y6I8 212 aa15.03■□□□□ -0
PHRF1-205ENST00000533464 GPR6P46095 362 aaPredicted RBP15.02■□□□□ -0
PHRF1-205ENST00000533464 DOLPP1Q86YN1 238 aa15.02■□□□□ -0
PHRF1-205ENST00000533464 LHFPL5Q8TAF8 219 aa15.02■□□□□ -0
PHRF1-205ENST00000533464 PRO1933Q9H354 126 aa15.02■□□□□ -0
PHRF1-205ENST00000533464 STXBP6Q8NFX7 210 aa15.02■□□□□ -0
PHRF1-205ENST00000533464 OR4C12Q96R67 309 aa15.02■□□□□ -0
PHRF1-205ENST00000533464 CISD1Q9NZ45 108 aaKnown RBP15.02■□□□□ -0
PHRF1-205ENST00000533464 CYB5R3P00387 301 aaPredicted RBP15.02□□□□□ -0.01
PHRF1-205ENST00000533464 UCP3P55916 312 aa15.02□□□□□ -0.01
PHRF1-205ENST00000533464 CFHR1Q03591 330 aa15.02□□□□□ -0.01
PHRF1-205ENST00000533464 SLC25A53Q5H9E4 307 aa15.02□□□□□ -0.01
PHRF1-205ENST00000533464 NHLRC3Q5JS37 347 aa15.02□□□□□ -0.01
PHRF1-205ENST00000533464 MRPL54Q6P161 138 aaKnown RBP15.02□□□□□ -0.01
PHRF1-205ENST00000533464 FUT9Q9Y231 359 aa15.02□□□□□ -0.01
PHRF1-205ENST00000533464 KIF26BQ2KJY2 2108 aa15.02□□□□□ -0.01
PHRF1-205ENST00000533464 SNRPCP09234 159 aaKnown RBP15.02□□□□□ -0.01
PHRF1-205ENST00000533464 COL8A1P27658 744 aa15.02□□□□□ -0.01
PHRF1-205ENST00000533464 ZNF596Q8TC21 504 aa15.02□□□□□ -0.01
PHRF1-205ENST00000533464 TNFRSF19Q9NS68 423 aa15.02□□□□□ -0.01
PHRF1-205ENST00000533464 TRAV20A0A0B4J274 112 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 PRR32B1ATL7 298 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 MELTFP08582 738 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 PTGDSP41222 190 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 FAM222BQ8WU58 562 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 TAF15Q92804 592 aaKnown RBP eCLIP15.01□□□□□ -0.016e-6■■□□□ 12.5
PHRF1-205ENST00000533464 MRPL13Q9BYD1 178 aaKnown RBP15.01□□□□□ -0.01
PHRF1-205ENST00000533464 NAGKQ9UJ70 344 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 MFSD2BA6NFX1 497 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 FAM74A7A6NL05 159 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 NPIPB7O75200 414 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 OR10J1P30954 320 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 HOXA6P31267 233 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 POC1AQ8NBT0 407 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 IL19Q9UHD0 177 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 KLK2P20151 261 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 CALHM1Q8IU99 346 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 A0A0B4J293 547 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 NEURL1O76050 574 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 P01737 135 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 RPL27AP46776 148 aaKnown RBP15.01□□□□□ -0.01
PHRF1-205ENST00000533464 LEAP2Q969E1 77 aa15.01□□□□□ -0.01
PHRF1-205ENST00000533464 USF1P22415 310 aaPredicted RBP15□□□□□ -0.01
PHRF1-205ENST00000533464 FAM216AQ8WUB2 273 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 MARCH11A6NNE9 402 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 SHISA5Q8N114 240 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 TP53RKQ96S44 253 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 RALGAPA1Q6GYQ0 2036 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 NBASA2RRP1 2371 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 J3QW42 95 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 HNRNPA3P51991 378 aaKnown RBP15□□□□□ -0.01
PHRF1-205ENST00000533464 CCDC144NLQ6NUI1 221 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 ZNF788Q6ZQV5 615 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 LDLRAD3Q86YD5 345 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 CD8AP01732 235 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms