RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.9□□□□□ -1.34e-12■■■■■ 45.5
PMS2P3-208ENST00000533167 CSPG4Q6UVK1 2322 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 CR1P17927 2039 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 A0A0B4J2A0 478 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 CENPVL3A0A0U1RRI6 287 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 hCG_1809904A0A1W2PP81 198 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 A0A1W2PPE2 198 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 A0A1W2PR64 198 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 A0A1W2PRV1 198 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 DBX1A6NMT0 343 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 SNRPGP15A8MWD9 76 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 BUB1B-PAK6H3BSN5 160 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 RAB29O14966 203 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 SLC22A5O76082 557 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 TOX4O94842 621 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 IGKV1-39P01597 117 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 IGKV1D-39P04432 117 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 CT45A6P0DMU7 189 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 CT45A5P0DMU8 189 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 CT45A7P0DMV0 189 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 F2RP25116 425 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 UCP1P25874 307 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 UBE2E1P51965 193 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 TAS2R31P59538 309 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 HABP2Q14520 560 aaPredicted RBP6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 TMEM187Q14656 261 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 ANKRD55Q3KP44 614 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 NCR3LG1Q68D85 454 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 ZNF66Q6ZN08 573 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 TMED4Q7Z7H5 227 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 LHFPL4Q7Z7J7 247 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 TBC1D26Q86UD7 250 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 DYNAPQ8N1N2 210 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 PIP4P2Q8N4L2 257 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 LRTM2Q8N967 370 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 OR13D1Q8NGV5 346 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 LHFPL5Q8TAF8 219 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 ZNF431Q8TF32 576 aaPredicted RBP6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 GLYATL2Q8WU03 294 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 MITD1Q8WV92 249 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 C17orf50Q8WW18 174 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 TP53RKQ96S44 253 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 NABP2Q9BQ15 211 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 HEXA-AS1Q9H8Q6 139 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 PRR13Q9NZ81 148 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 PIPOXQ9P0Z9 390 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 SHPKQ9UHJ6 478 aa6.9□□□□□ -1.3
PMS2P3-208ENST00000533167 A0A1W2PPI3 338 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 VGLL3A8MV65 326 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 H0Y980 276 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 J3QLI3 93 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 TNFSF12O43508 249 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 DUS4LO95620 317 aaKnown RBP6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 DHFRP00374 187 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 OR5AC1P0C628 307 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 P0C879 139 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 ZNF16P17020 682 aaPredicted RBP6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 AKR1C4P17516 323 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 HLA-GP17693 338 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 GPR12P47775 334 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 ZNF816Q0VGE8 651 aaPredicted RBP6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 C2orf68Q2NKX9 166 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 TPTE2P1Q5T6R2 138 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 LYG1Q8N1E2 194 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 OR5AN1Q8NGI8 311 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 CFHR4Q92496 578 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 RBMXL1Q96E39 390 aaKnown RBP6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 TMEM56Q96MV1 263 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 MRPL20Q9BYC9 149 aaKnown RBP6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 TMEM222Q9H0R3 208 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 FAM212BQ9NTI7 297 aaPredicted RBP6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 KCNS2Q9ULS6 477 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 C14orf166Q9Y224 244 aaKnown RBP6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 AUP1Q9Y679 476 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 TMEM56-RWDD3S4R434 201 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 DOCK11Q5JSL3 2073 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 ABCA1O95477 2261 aa6.89□□□□□ -1.31
PMS2P3-208ENST00000533167 ITPR3Q14573 2671 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 YLPM1P49750 1951 aaKnown RBP6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 IGHV1-69DA0A0B4J2H0 117 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 TEX13DA0A0J9YY54 714 aaPredicted RBP6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 C3orf85A0A1B0GTC6 90 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 A8MV72 311 aaPredicted RBP6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 H0YJW9 148 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 M0R1X1 148 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 RBFOX2O43251 390 aaKnown RBP eCLIP6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 CDS2O95674 445 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 TGFAP01135 160 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 IGHV1-69P01742 117 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 HLA-AP01891 365 aaKnown RBP6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 IGHV4-38-2P0DP08 117 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 PRRX1P54821 245 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 SLC9A3R2Q15599 337 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 SP6Q3SY56 376 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 MIDNQ504T8 468 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 FBLN7Q53RD9 439 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 MINOS1Q5TGZ0 78 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 DCAF12L2Q5VW00 463 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 CYB5R2Q6BCY4 276 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 SPNS3Q6ZMD2 512 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms