RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PLXNA2O75051 1894 aa13.29□□□□□ -0.28
PPFIA1-222ENST00000532504 IGF2RP11717 2491 aa13.29□□□□□ -0.28
PPFIA1-222ENST00000532504 CREBBPQ92793 2442 aa13.29□□□□□ -0.28
PPFIA1-222ENST00000532504 TMEM50BP56557 158 aa13.29□□□□□ -0.28
PPFIA1-222ENST00000532504 SLC7A5P1Q8MH63 180 aa13.29□□□□□ -0.28
PPFIA1-222ENST00000532504 MPC2O95563 127 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 PTBP3O95758 552 aaKnown RBP13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 EFNA4P52798 201 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 CENPVQ7Z7K6 275 aaPredicted RBP13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 WDR31Q8NA23 367 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 C12orf77C9JDV5 145 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 HPXP02790 462 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 LOXL3P58215 753 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 RHOBP62745 196 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 HABP2Q14520 560 aaPredicted RBP13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 SLC35E4Q6ICL7 350 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 PRR27Q6MZM9 219 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 SLC25A42Q86VD7 318 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 CCDC28AQ8IWP9 274 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 SSMEM1Q8WWF3 244 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 AAMDCQ9H7C9 122 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 TXNL1O43396 289 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 CLEC12BQ2HXU8 276 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 RPL39P5Q59GN2 51 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 DUSP18Q8NEJ0 188 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 RPUSD4Q96CM3 377 aaKnown RBP13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 TMEM208Q9BTX3 173 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 COL4A4P53420 1690 aaPredicted RBP13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 PLAUP00749 431 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 MMP7P09237 267 aaPredicted RBP13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 C20orf204Q6ZNR8 217 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 VKORC1L1Q8N0U8 176 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 OR51I2Q9H344 312 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 ZNF107Q9UII5 783 aaPredicted RBP13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 SPG11Q96JI7 2443 aa13.28□□□□□ -0.28
PPFIA1-222ENST00000532504 PQLC2LA1A4F0 135 aa13.27□□□□□ -0.28
PPFIA1-222ENST00000532504 CRYGSP22914 178 aa13.27□□□□□ -0.28
PPFIA1-222ENST00000532504 HOXD11P31277 338 aaPredicted RBP13.27□□□□□ -0.28
PPFIA1-222ENST00000532504 RABAC1Q9UI14 185 aa13.27□□□□□ -0.28
PPFIA1-222ENST00000532504 NPY1RP25929 384 aa13.27□□□□□ -0.28
PPFIA1-222ENST00000532504 UNC119Q13432 240 aa13.27□□□□□ -0.28
PPFIA1-222ENST00000532504 SCARB1Q8WTV0 552 aa13.27□□□□□ -0.28
PPFIA1-222ENST00000532504 WNK2Q9Y3S1 2297 aa13.27□□□□□ -0.29
PPFIA1-222ENST00000532504 SHISA3A0PJX4 238 aa13.27□□□□□ -0.29
PPFIA1-222ENST00000532504 C15orf54Q8N8G6 183 aa13.27□□□□□ -0.29
PPFIA1-222ENST00000532504 RHOFQ9HBH0 211 aa13.27□□□□□ -0.29
PPFIA1-222ENST00000532504 EXOSC2Q13868 293 aaKnown RBP13.27□□□□□ -0.29
PPFIA1-222ENST00000532504 DPM3Q9P2X0 92 aa13.27□□□□□ -0.29
PPFIA1-222ENST00000532504 PGA5P0DJD9 388 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 RPL8P62917 257 aaKnown RBP13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 ZNF66Q6ZN08 573 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 TMEM186Q96B77 213 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 NIPSNAP3BQ9BS92 247 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 PLA2G10O15496 165 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 OVCH2Q7RTZ1 564 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 ZNF418Q8TF45 676 aaPredicted RBP13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 EAF1Q96JC9 268 aaPredicted RBP13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 ADAMTS9Q9P2N4 1935 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 B3GALNT1O75752 331 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 FBP1P09467 338 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 MARVELD1Q9BSK0 173 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 CADP27708 2225 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 VAX1Q5SQQ9 334 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 Q8WTZ3 238 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 MMD2Q8IY49 270 aa13.26□□□□□ -0.29
PPFIA1-222ENST00000532504 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.25□□□□□ -0.297e-7■■■■□ 21.5
PPFIA1-222ENST00000532504 IGKV1-9A0A0C4DH69 117 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 PGLYRP1O75594 196 aaPredicted RBP13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 PHF3Q92576 2039 aaKnown RBP13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 CEACAM18A8MTB9 384 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 DYNLT3P51808 116 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 OR8I2Q8N0Y5 310 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 RXFP4Q8TDU9 374 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 TMEM231Q9H6L2 316 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 A0A0G2JK05 382 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 AKR1C3P42330 323 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 RAG2P55895 527 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 NCMAPQ5T1S8 102 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 C5orf63A6NC05 138 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 REG1AP05451 166 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 LURAP1Q96LR2 239 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 PPP1R3EQ9H7J1 279 aa13.25□□□□□ -0.29
PPFIA1-222ENST00000532504 BCL2L11O43521 198 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 SELLP14151 372 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 TFPI2P48307 235 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 RPS11P62280 158 aaKnown RBP eCLIP13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 OR5I1Q13606 314 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 GAMTQ14353 236 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 IGF2-ASQ6U949 168 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 NTNG2Q96CW9 530 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 TVP23CQ96ET8 276 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 RCC2Q9P258 522 aaKnown RBP13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 HIST2H3AQ71DI3 136 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 FAM215AQ9Y5M1 114 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 KBTBD11-OT1A0A1B0GTJ5 212 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 PPOXP50336 477 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 PLAC9Q5JTB6 97 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 LFNGQ8NES3 379 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 OR2T10Q8NGZ9 312 aa13.24□□□□□ -0.29
PPFIA1-222ENST00000532504 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms