RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 H7C2Y5 167 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 OVOL1O14753 267 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 HSPA12AO43301 675 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 PROP1O75360 226 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 ATP6V1G2O95670 118 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 SCTP09683 121 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 RPS25P62851 125 aaKnown RBP12.22□□□□□ -0.45
CPSF1-205ENST00000531042 PLGLAQ15195 96 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 TRAM1Q15629 374 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 CD200R1LQ6Q8B3 271 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 TCTEX1D1Q8N7M0 179 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 CASTOR1Q8WTX7 329 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 ALX4Q9H161 411 aaPredicted RBP12.22□□□□□ -0.45
CPSF1-205ENST00000531042 DUSP21Q9H596 190 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 Q9N2K0 584 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 ISYNA1Q9NPH2 558 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 TPRKBQ9Y3C4 175 aa12.22□□□□□ -0.45
CPSF1-205ENST00000531042 ARL6IP5O75915 188 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 HSMCR30P0CW71 290 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 VEGFCP49767 419 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 AQP4P55087 323 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 TMEM267Q0VDI3 215 aaPredicted RBP12.21□□□□□ -0.45
CPSF1-205ENST00000531042 RAB11BQ15907 218 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 DRAXINQ8NBI3 349 aaPredicted RBP12.21□□□□□ -0.45
CPSF1-205ENST00000531042 ABHD5Q8WTS1 349 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 DLX4Q92988 240 aaPredicted RBP12.21□□□□□ -0.45
CPSF1-205ENST00000531042 PTX4Q96A99 478 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 ARHGAP5-AS1Q96IT6 56 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 ASCL2Q99929 193 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 PECRQ9BY49 303 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 TOLLIPQ9H0E2 274 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 C12orf4Q9NQ89 552 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 TPSG1Q9NRR2 321 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 RNF150Q9ULK6 438 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 GAB2Q9UQC2 676 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 A3GALT2U3KPV4 340 aa12.21□□□□□ -0.45
CPSF1-205ENST00000531042 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 LINC01619G3V211 115 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 LY86O95711 162 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 LGALS1P09382 135 aaKnown RBP12.2□□□□□ -0.46
CPSF1-205ENST00000531042 CPEP16870 476 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 PSMA1P25786 263 aaKnown RBP12.2□□□□□ -0.46
CPSF1-205ENST00000531042 SLURP1P55000 103 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 CLDN12P56749 244 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 PSG5Q15238 335 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 AKIRIN2Q53H80 203 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 PYHIN1Q6K0P9 492 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 PPP1R27Q86WC6 154 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 NRG4Q8WWG1 115 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 CLCC1Q96S66 551 aa12.2□□□□□ -0.46
CPSF1-205ENST00000531042 CMSS1Q9BQ75 279 aaKnown RBP12.2□□□□□ -0.46
CPSF1-205ENST00000531042 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
CPSF1-205ENST00000531042 METTL1Q9UBP6 276 aaKnown RBP12.2□□□□□ -0.46
CPSF1-205ENST00000531042 IGHV4OR15-8A0A075B7B6 117 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 A0A087WW49 117 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 RGS10O43665 173 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 IGKV1-16P04430 117 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 SNRPBP14678 240 aaKnown RBP12.19□□□□□ -0.46
CPSF1-205ENST00000531042 CALRP27797 417 aaKnown RBP12.19□□□□□ -0.46
CPSF1-205ENST00000531042 LINC00205P59089 165 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 MLLT11Q13015 90 aaPredicted RBP12.19□□□□□ -0.46
CPSF1-205ENST00000531042 C2orf76Q3KRA6 126 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 ACTBL2Q562R1 376 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 PLAC9Q5JTB6 97 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 UNQ5815/PRO19632Q6UWF5 114 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 ZNF562Q6V9R5 426 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 LFNGQ8NES3 379 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 FAM3DQ96BQ1 224 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 ZNF221Q9UK13 617 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 SMAD5-AS1Q9Y6J3 95 aa12.19□□□□□ -0.46
CPSF1-205ENST00000531042 SORL1Q92673 2214 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 TRDCB7Z8K6 153 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 LDLRAD4O15165 306 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 SAP30O75446 220 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 SPDEFO95238 335 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 CA2P00918 260 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 TFAP2AP05549 437 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 RPS16P62249 146 aaKnown RBP12.18□□□□□ -0.46
CPSF1-205ENST00000531042 FABP5Q01469 135 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 PDPNQ86YL7 162 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 ZNF383Q8NA42 475 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
CPSF1-205ENST00000531042 MGLLQ99685 303 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 CCDC90BQ9GZT6 254 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 RDH8Q9NYR8 311 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 V9GY05 133 aa12.18□□□□□ -0.46
CPSF1-205ENST00000531042 STAB2Q8WWQ8 2551 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 TMEM272A0A1B0GTI8 110 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 DENRO43583 198 aaKnown RBP12.17□□□□□ -0.46
CPSF1-205ENST00000531042 IGHV3-11P01762 117 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
CPSF1-205ENST00000531042 CRHBPP24387 322 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 RANBP1P43487 201 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 PSMD7P51665 324 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 PLA2G7Q13093 441 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 ACSM6Q6P461 480 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 PRSS48Q7RTY5 328 aa12.17□□□□□ -0.46
CPSF1-205ENST00000531042 RHOVQ96L33 236 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms